Aeromonas dhakensis: CK627_15600
Help
Entry
CK627_15600 CDS
T05186
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK627_15600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adh03019
]
CK627_15600
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK627_15600
Messenger RNA biogenesis [BR:
adh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK627_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Flavi_DEAD
P-loop_SecA
LPD16
Motif
Other DBs
NCBI-ProteinID:
ASX12104
LinkDB
All DBs
Position
complement(3358574..3359980)
Genome browser
AA seq
468 aa
AA seq
DB search
MSFTSLGLAEPLLRAVAEQGYDTPSPIQQQAIPAVLAGRDLMAAAQTGTGKTAGFTLPML
QRLTESKRKVSPNRIRALVLTPTRELAAQVGESVRNYGKHLPIRSHVVFGGVSINPQMMA
TRRGLDVLVACPGRLMDLYNQNAVKFDEVEILVLDEADRMLDMGFIRDIRRILALLPKKR
QNLLFSATFADEIRELATGLLDNPAVIEVTPRNSTAERIEQLVHPCDKANKIALLSHLIS
SNNWQQVLVFTRTKHIANRVAEKLEKDGISAAAIHGNKSQGARTRALSGFKDGSVRVMVA
TDIAARGLDIDKLPQVVNFELPNVAEDYVHRIGRTGRAGAAGHAISLVAADEGKLIKAIE
RLTKQSIPCEQVAGFEASRETLDNISRGIGAPLRKEPRDPSEQRRAPRPQGQGQRQGAGR
SGNGAGGNGGGNRTGNGGKPKPQGGQRPADGAAKPAQARRPRRSTHNQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagttttacttccctcggtctggccgaacccttgttgcgtgccgttgccgagcaaggc
tacgacaccccgtctcccattcagcaacaagcgatcccggcggtactggctggccgtgat
ctgatggccgccgcccagaccgggaccggcaagaccgcaggttttaccctgccgatgctg
caacgcttgaccgagagcaagcgcaaggtctccccgaatcgcatccgtgccctggtgctg
accccgacccgcgagctagccgcccaggtgggcgagagcgtgcgcaactacggcaagcac
ctgccgatccgcagccacgtggtatttggcggcgtgagcatcaacccgcagatgatggcg
actcgccgtggtctggacgtgctggtggcctgcccgggccgtctgatggacctttacaac
cagaacgccgtcaagttcgatgaagtcgagatcctggtgctggacgaagcggaccgcatg
ctcgacatgggctttatccgcgacatccgccgcatcctggctctgttgccgaaaaagcgt
cagaacctgctcttctccgccactttcgccgacgaaattcgcgagctggctactggcctc
ttggacaacccggcggtgatcgaagtgaccccgcgcaacagcaccgccgagcgcatcgag
cagctggtgcacccgtgcgacaaggccaacaagattgccctgctgagccacctcatctcc
agcaacaactggcagcaggtgctggtgtttacccgtaccaagcacatcgccaaccgggtt
gccgagaagcttgagaaagacggcatcagcgccgccgccatccacggcaacaagagccag
ggggctcgtacccgcgccctgtccggcttcaaggatggcagcgtgcgcgtcatggtggcg
accgacatcgctgcccgcggcctcgacatcgacaagctgccccaggtggtcaacttcgag
cttccgaacgtggcggaagattacgtgcaccgtatcggccgtaccggccgtgccggcgcc
gccggtcacgccatctccctggtggcggcggacgaaggcaagctcatcaaggccatcgag
cggctgaccaagcagagcatcccctgcgagcaggtggcgggcttcgaagcctcccgcgag
acgctcgataacataagccgtggcatcggtgcgccgctgcgcaaagagccgcgcgatccg
agcgagcagcgccgtgcgccgcgtccgcaaggtcaaggccagcgtcaaggtgccggtcgc
tccggcaatggcgccggtggtaacggtggtggcaatcgcactggcaacggcggcaagccc
aagccccagggtggtcaacgtccggctgatggcgccgccaagccggcccaggcccgtcgt
ccgcgccgttctacccataaccagtaa
DBGET
integrated database retrieval system
