Aeromonas dhakensis: CK627_15905
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Entry
CK627_15905 CDS
T05186
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK627_15905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adh03019
]
CK627_15905
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK627_15905
Messenger RNA biogenesis [BR:
adh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK627_15905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_19
AAA_30
LPD39
PRAI
Motif
Other DBs
NCBI-ProteinID:
ASX12153
LinkDB
All DBs
Position
3413329..3414708
Genome browser
AA seq
459 aa
AA seq
DB search
MSFNELGLSPHILRAVKELGYEQPTPIQQQAIPAILAGQDVLGGAQTGTGKTAGFTLPML
QRLLANHGRGRRQVRALVLTPTRELAAQVGESIIKYAHHLPFRTLIAYGGVSIKPNLDAI
KLGIDILVATPGRLLDLLTQGALTLTELEVLVLDEADRMLDMGFIHDIRRIMKALPAERQ
TLLFSATFSDDIKALADDLLNDPTLIEVDPSNTAAEQVTQRIIQVDRERRRELLSHMIGR
GNWQRVLVFVRTKQIADRLAQQMQKDGLDTVAIHGDKSQGARNRALADFREGKVRVLVAT
DIAARGLDIDQLPHVINFELPQMAEDYIHRIGRTGRAGRGGEAISLVSQDELGQLKAIEA
LIGQSLSVEILDGYEPSGKPSRQTLPGSKPVQNPPRARGAANAKGGKGKPAAGKGKGDGA
KKPAPARKREVVGEDIGFSPMRRLPKAQRDDYQDNSNEE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaacgaactgggtctgtccccgcacatcctgcgggccgtcaaggagctgggt
tacgaacagccaacccccatccagcagcaagccattcccgccattctggccgggcaggac
gtgctcggcggcgcccagacaggcacaggcaagacggccggcttcaccctgcccatgctg
cagcggctgctggccaaccatggccgtggccgccgtcaggtgcgggccctggtgctgacc
ccgacccgtgaactggccgcccaggtgggtgagagcatcatcaaatatgcccaccacctg
ccgtttcgcaccctgatcgcctacggcggcgtcagcatcaagcccaatctggacgctatc
aagctcggcatcgacatcctggtggccaccccgggccgcttgctggatctgctgacccag
ggtgccctgaccctgaccgagctggaagtgctggtgctggatgaggcggatcgcatgctc
gacatgggcttcatccacgacattcgccgcatcatgaaggcgctgccggccgaacggcag
accctgctcttctccgccactttctcggacgacatcaaggcgctggcggacgatctgctc
aacgacccgaccctgatcgaggtcgaccccagcaacaccgccgccgaacaggtgacccag
cgcatcatccaggtcgaccgggaacgccgtcgcgagctgctctcccacatgatcggtcgc
ggcaactggcagcgggtgctggtgttcgtacgcaccaagcagattgccgacaggctcgcc
cagcagatgcaaaaggatggcctggataccgtcgccattcacggcgacaagagccagggt
gcccgcaaccgggcgctggcggattttcgcgagggcaaggtgcgagtgctggtggcgacc
gacatcgcagcccggggtctggacatcgatcagctgccccacgtgatcaacttcgagcta
ccccagatggcggaggattacatccaccgcatcggccgcaccggccgcgccggtcgtggc
ggtgaggccatctcgctggtgagccaggacgagctgggtcagctcaaggccatcgaggcg
ctgatcggccaatccctctccgtcgagatcctggacggctatgagcccagcggcaaaccg
agccggcagaccctgcccggcagcaagccggtacaaaatccgccgcgcgcccgtggcgcc
gccaatgccaagggtggcaagggcaagcccgccgccggcaaaggaaagggggatggtgcc
aagaaacccgccccggcgcgcaagcgggaagtggtgggcgaggatatcggcttttccccc
atgcgccgcctgccgaaggcccagcgcgacgactatcaggacaactccaacgaggagtaa
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