KEGG   Aeromonas dhakensis: CK627_16780
Entry
CK627_16780       CDS       T05186                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
adh  Aeromonas dhakensis
Pathway
adh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:adh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CK627_16780 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:adh02044]
    CK627_16780 (icmF)
Secretion system [BR:adh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CK627_16780 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA_16 Wzy_C_2 MlaC AAA_18
Other DBs
NCBI-ProteinID: ASX12317
LinkDB
Position
complement(3615058..3618543)
AA seq 1161 aa
MFKTIFTFLRQQLPKLKPSWPLLGAVLWVLALILVWWLGPRLELRGAKPFEPLWGRVVFT
LLWLWLLLGVVSWRVWRKMQQLKAERQHEQVLEQDPVKGLIDRQALFLDRWLQALNTHLG
KGALYAMPWYLVLGLPGSGKSSLIHRANPANKLNPRLDTELRDVAQDQLVDCWLGEQAVM
LDPAGVLLSQSEAELDPQARKHERLWLHLLGWLNEHRRRQPLNGLVLTVDLAWLSHASVA
ERKAYAQLMRSRLQEVSATMNTRLPLYVTFTKLDLLRGFDVIYQQLDKEAREAVLGVTFK
PGADWQQDLALFWDQWVDNLNQNLPELMLSRLDAAQRNALFSFVRQLAGLKDYVTSLLAE
TLAIEESKPLLVRGVYVSSVYQQGVPFDAFAQAASRRYNLPEPIHSALRGESNTYFVRQL
FSSIIFPEAHLAGENRLHTLYRRRRMAIGIGCLSLFSAALIGGWHYFYRVNEEAGRNVLT
KAQAFMETNEVADAHAFGVSQLPRLNLIREATLSFGNYRERMPLVADLGLYQGDEIGPYV
EGSYLQLLSLRFLPAQMQGLLADLNQAPAGSEEKLAILRVMRMLDDASGRNKELVAQYMA
SRWQKAFPGQGAVQEQLMGHLDYALDHTNWYGARAERDQAAITAFVPFKEPVYGAQRELG
KLPMYQRVYQNLVVKAGDVLPPDLNVRDEVGPTFDTVFALRSDNAGQVPRLLTWPGFNDF
FLKQDKALIDLTAMDAWVLGQRKLSQLSEADRKEITRQVNDRYVTDYVNQWQKLLTNLDV
QTLENPEQALDVLAAITGNDQPFQRVLASLDDNTRIRKISDMEGDPAQAISARIGRPFMA
TNGVLAGRGEQGPLIQEVNQKLVELQHYLELIVNATEPGQSALKAVQLRMTNKYADPVFA
LQQYARSLPAPLDRWVGQLSEQSSRLVIDLAMSSLNQEWQDKVLAPFNSQLAGRYPFDPS
SSKDVPLSEMERFFAPGGTLDSFYQVNLKPMVESGLMEGEFSSPIQAELVKQLDRAARIR
QIFFSQQGNLEVQFALEPIELTANKRRSVLNLDGQLLEYAHGRRTKIPLVWPNTMRDGAE
SKITLVPAARERSPRSEGFVGPWAMFRLMDKGELTQVNDATFDVRFPVDQGAMTYRVYTD
SAQNPFTGGLFSQFRLPESLY
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgttcaaaaccatttttacttttctgcggcaacagctgccgaaattgaaaccctcctgg
cccctgctcggtgctgtgctctgggtgctcgccctcatcctggtgtggtggctgggccct
cgtctcgagctgcgcggcgccaagccgttcgagccgctgtgggggcgggtggtgttcacc
ctgctctggctctggctgctgctgggggtagtctcctggcgggtgtggcgcaagatgcag
cagctcaaggccgagcgtcagcacgaacaggtgctggagcaggatccggtcaaggggctc
atcgacaggcaggcgctgttcctcgatcgctggctgcaggcgctgaatacccatctgggc
aagggggcgctctacgccatgccctggtatctggtgctggggctgcccggcagcggcaag
agcagcctcattcaccgcgccaacccggccaacaagctcaacccgagactcgacaccgaa
ctgcgcgacgtggcacaggatcagctggtggattgctggctgggggaacaggcagtgatg
ctggatcccgccggggtgctgctctcccaaagcgaagccgaactggatccgcaggcccgc
aagcatgagcggctctggctgcacctgcttggctggctcaatgaacaccgccgtcgccag
cccctcaacggcctggtgctgaccgtggatctggcctggctctcccacgccagcgtggcc
gagcgcaaggcctatgcccagctgatgcgctcgcgcttgcaggaggtgtcggccaccatg
aatacccggttgccgctctatgtcaccttcaccaagctcgatctgctgcgcggctttgac
gtgatctaccagcagctcgacaaggaggcccgcgaggccgtgctgggggtgacttttaag
ccgggcgcagactggcagcaggatctggccctgttctgggatcagtgggtggacaacctc
aaccagaatctgcccgagctgatgctgagccggctcgatgctgcccagcgcaacgcgctg
ttctcgttcgttcgccagctggcggggctcaaggattacgtgaccagcctgctggccgag
actctggccatcgaggagagcaagccactgttggtgcgcggggtttatgtcagctccgtc
tatcagcagggggtgccgttcgatgcgtttgcccaggcggcctcccgtcgctacaacctg
ccagagcccatccactcggccctgcgcggggagtcgaacacctatttcgtgcgccagctc
ttctcctccatcatcttcccggaggcccatctggccggcgagaaccggctgcacaccctc
tatcgccgtcgccgcatggccattggcattggctgcctgtcgctcttctcggccgccctc
atcggtggctggcactacttctaccgggtcaacgaggaggcgggtcgcaacgtattgacc
aaggcccaggccttcatggagaccaacgaggtggccgacgcccacgccttcggggtgagc
cagctgccgcgcctcaacctcattcgcgaggcgaccctctcctttggcaactaccgcgag
cgcatgccgctggtggccgacctcggcctctaccagggggacgaaattggtccttatgtg
gagggttcctacctgcaactgttgagcctgcgcttcctgccggcccagatgcagggattg
ctggccgatctcaaccaggcgcctgccggcagcgaagagaagctcgccattttgcgggtg
atgcggatgctggatgatgcgtccggtcgcaacaaggagctggtggcgcagtacatggcg
agccgttggcagaaggccttcccggggcagggtgcggtgcaggagcagctgatggggcac
ctggactatgccctcgaccacaccaactggtatggcgccagggctgagcgggatcaggcc
gccatcaccgccttcgtgccgttcaaggagccggtctacggtgcccagcgcgagctcggc
aagctgcccatgtatcagcgggtctaccagaatctggtggtgaaagcgggcgatgtgctg
ccgccggatctcaacgtccgtgacgaggtgggccccaccttcgacacagtgtttgccctg
cgcagcgacaacgccggccaggtgccgcgcctgctgacctggcccggtttcaacgacttc
ttcctcaaacaagacaaggccctcatcgatctcaccgcgatggatgcctgggtgctgggc
cagcgcaagctgagccagctgagcgaggcggatcgcaaggagatcacccgtcaggtcaac
gaccgttacgtcaccgattacgtcaaccaatggcaaaaactgctgaccaatctggacgtg
cagaccctggagaacccggagcaggcgctggacgtgctcgccgccatcaccggcaacgat
cagccgttccagcgagtgctggcctcgctggatgacaacacccgcattcgcaagatctcc
gacatggaaggggacccggcccaggccatcagcgcccgcatcggtcgcccctttatggcc
actaatggagtattggctggacgtggtgagcagggaccgctcattcaggaggtcaaccag
aagctggtggagctgcagcactacctggagctcatcgtcaacgccaccgagccgggccag
tccgccttgaaagcggtgcagctgcgcatgaccaacaagtacgccgatccggtgttcgcg
ctgcagcaatatgcccgcagcctgccggccccgctcgatcgctgggtgggtcagctctcc
gagcagagctcccgactggtgatcgacctggccatgtcctccctcaaccaggagtggcag
gacaaggtgctggcccccttcaacagccagctggccggccgttatccgtttgatccgagc
tcgagcaaggacgttcccctctccgagatggagcgcttctttgcgccgggcgggacgctg
gacagcttctatcaggtcaacctcaaacccatggtggagagcggtctgatggaaggggag
ttcagctcgcccatccaggccgagctggtcaagcagctggaccgtgcggcccgcatccgt
cagatcttcttcagtcagcagggcaacctggaggtgcagttcgccctcgagcccattgag
ctcaccgccaacaagcggcgcagcgtgctgaacctggacggccaactgctggaatacgcc
cacggccgtcgtaccaagatcccgctggtgtggcccaacaccatgcgcgacggggccgag
agcaagatcaccctggtgccggccgcccgcgagcgttcaccgcgcagtgaaggcttcgtc
ggcccctgggctatgttccgcctgatggacaagggggagctgacccaggtcaatgacgcc
accttcgatgtgcgcttcccggtggatcagggggccatgacctatcgcgtctacaccgac
agcgcgcaaaaccccttcaccggcggcctgttcagccagttcagactgcccgaatccctc
tattga

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