Aeromonas dhakensis: CK627_20195
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Entry
CK627_20195 CDS
T05186
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03030
DNA replication
adh03430
Mismatch repair
adh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK627_20195
03430 Mismatch repair
CK627_20195
03440 Homologous recombination
CK627_20195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adh03032
]
CK627_20195
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_20195
Enzymes [BR:
adh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK627_20195
DNA replication proteins [BR:
adh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK627_20195
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK627_20195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ASX13560
UniProt:
K1K8P0
LinkDB
All DBs
Position
complement(4379023..4382502)
Genome browser
AA seq
1159 aa
AA seq
DB search
MADPRFIHLRVHTDFSMVDGLQKINPIVGAAAADNMPALALTDQMNMCGLVRFYGAAHGK
GIKPLVGADFWVQSSELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKEW
LVEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCVAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVNLASEFALPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQDEMCELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVAKSKEGL
EERLEFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVSE
MYGRDAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKRSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGNEA
ISYPDEKWQHESLQPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAIKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccccgtttcattcacctgcgggtgcataccgacttttccatggtggatggt
ctgcagaagatcaaccccatcgtcggggccgcggcggccgacaacatgccggcgctggcc
ctgaccgaccagatgaacatgtgcggcctggtgcgcttctatggcgccgcccacggcaag
gggatcaagcctctggtcggtgccgacttctgggtgcagagcagtgaacttggcgacgag
cagtttcgcctcactctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctatcagcgcggccatgtgcaggggcggccggtcatcgacaaggagtgg
ctggtcgagcacgccaagggggtgatcgtgctctccggcgggcgcgagggggacgtgggc
aagttcctgctcaagggcaaccgccagatgaccgagcagtgcgtcgccttctaccagacc
cacttccctgacgcctactatctggagctgctgcgtaccggtcgccccgacgaggaggtc
tacctgcacatggcggtgaacctcgcgagcgagttcgcgctgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgacgcccacgagatccgggtggccatccac
gacggctataccctgatggacaagcgccggccgcgccgctacagcccgcagcagtacctg
cgcagtcaggacgaaatgtgcgagctgttcgccgacatcccggaggcgctggagaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgtctgggtgaatacttcctgcccaac
ttccccaccggcgacatgaccaccgaagacttcctggtggccaagtcgaaagaggggctg
gaggagcggctcgagtttctgttcccggatccggcggtgcgggccgagcgtcgtcccgag
tatgacgagcgcctcgacatcgagctgaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatcccggtcggtccg
ggccggggctcgggtgcaggttcgctcgttgcctacgccctcaagatcaccgacctggat
ccactcgaatttgacctgctgttcgaacgtttcctgaaccccgagcgggtctccatgccc
gacttcgacgtcgacttctgcatggaccgacgggacgaggtgatcgagcacgtctccgag
atgtacggccgggatgctgtgtcccagatcatcaccttcggcagcatggcggccaaggcg
gtggtacgggacgtgggccgggtgctgggccacgcctacggtttcgtcgatcgcatctcc
aagctgatcccgccggatcccggcatgaccctggccaaggcgttcgaggccgagcccaag
ctgcccgagctctacgagcaggacgaggaggtcaaagacctcatcgacatggcgcgccgg
ctggaaggggtggtgcgcaacgccggcaaacacgccggtggcgtggtgatcgcgcccacc
aagatcaccgactttgcaccgctctactgcgatgacgagggccatcacccggtcacccag
ttcgacaagaatgacgtggaatacgccggcctggtgaagttcgacttcctgggtctgcgc
acgctcaccatcatcgactgggcgctcggcatgatcaacccgcgccttgccaaagagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagcgctcgttcgacctgctg
cagcgctacgagaccaccgcggtattccagctcgaatcccgcggcatgaaggatctcatc
aagcggctgcagccggactgcttcgaagacatgatcgctctggtggccctgttccggccg
ggcccgctccagtcaggcatggtggacaacttcatcgaccgcaaacacggcaatgaagcc
atctcctatccggacgagaagtggcagcacgagagtctgcaacccatcctggagcccacc
tacggcatcatcctctaccaggagcaggtgatgcagatcgcccagaccctggccgggtac
accctggggggcgcggatatgctgcgccgggccatgggcaagaaaaagcccgaggagatg
gccaagcagcgggccggttttgaagagggagccatcaagaacggcgtcgacggcgagctg
gcgatgaagatcttcgacctggtggagaagttcgcgggctacggcttcaacaaatcgcac
tccgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcc
gagttcatggcggcggtcatgaccgcagacatggacaacaccgacaagatagtgaccctg
gtggacgagtgtcagcggatggggctgacggtgatcccgccggacgtcaacaccggtcgc
taccgcttcagcgtcaacgaggacggtcatatcgtctacggcatcggcgcggtgaagggg
gtgggggaaggtcccatcgatgcgatcctggaagcacgggatcgggatggcccgttccgc
gacctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagcttatcctctccggcgccatggaccggctcggccctcaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcacgccaaggcccaggcggtggggcag
gtcgacatgttcggcgtgctcaccgaggagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcccgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctgaccggtcaccccatcaaccagtacagcggcgaattacgtcgttacacctcgggtcgc
ctgtgcgatctgcatcccacctcccgcgataccgtgaccacggcggctgggctggtgatc
gcggcgcgcagcatggtgaccaagcgcggcaacaagatggggatcttcaccctggacgac
cgttccggtcgcctcgatgtgaccctgttcagtgaagcgctggaaaaatatgaagagttg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagagagcgttttgcc
agggcaatccgcatctctctcgatgaacagcgaatcgatgatcgctttttcccgcgtttg
tgcgagattttggagcccgcccgtgccggagtctgtccggttcaggtaaactatcgtcgc
cccggctcccgggtgcgattgacgctcggcaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgcgtcctgctgggacgagagcgggttgaattggtttttgattag
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