Alloalcanivorax dieselolei: B5T_00448
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Entry
B5T_00448 CDS
T02259
Name
(GenBank) Transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5T_00448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adi03000
]
B5T_00448
03400 DNA repair and recombination proteins [BR:
adi03400
]
B5T_00448
Enzymes [BR:
adi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B5T_00448
Transcription factors [BR:
adi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B5T_00448
DNA repair and recombination proteins [BR:
adi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B5T_00448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HTH_23
HHH
Motif
Other DBs
NCBI-ProteinID:
AFT68733
UniProt:
K0C853
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All DBs
Position
461336..462796
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AA seq
486 aa
AA seq
DB search
MIGSMWIDDDQCYQALRTRDVRFDGRFFVAVSSTGVYCRPVCPARLPKRENCRFFASAAA
AESEGYRPCLRCRPELAPGDASVDANRRLARQAAEYLDAGAGDGESLTTLAERLGVTDRH
LRRAFHSEFGVAPVEYVQTRRLLLARRLLRDTGLTITEVALAAGFNSLRRFNTLFRGRYG
QPPSAWRRAASGRRTSDGELVFHLSYRPPFDWEALRDFLAARAIPGVEGMERGQYRRTAL
IRRGDKVHRGWLTVAPGPRNGLTVTLSESLAPVVPEVLVRLRRLFDLDAQPALVAQRLGS
LAAARPGLRVPGAFDGFEAAVRAVLGQQITVKAARTLAGRVAASLGEPLDTPFEDLTTTF
PEAAVVAAAEAETLGLLGIIRARVKAIQALAAACAEDPMLLSPAADVERTLTELKALPGI
GDWTAQYLAMRALSWPDAFPAADLGVLKALGETSAVAVRRRAEAWRPWRAYAVMHLWFGG
QEDKTP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcggttccatgtggattgacgatgatcagtgttatcaggcccttcgcacccgcgat
gttcgtttcgacgggcgctttttcgtggcggtgtcctccaccggcgtgtactgccggccg
gtgtgtccggcgcgtctgccgaagcgggagaactgccgtttcttcgccagcgccgcggcg
gcggaatccgaaggctaccgtccttgtctgcgctgccggccggaactggcgccgggggat
gccagcgtggacgcgaaccgccgcctggccagacaggcggcggaatatctggatgccggg
gcgggcgatggggaatcgctgacgactctggcggaacggcttggcgtcaccgatcgccat
ttgcgccgggctttccactccgaattcggcgtggcgccggtggaatacgtgcaaacccgg
cgcttattgctggcccggcgtctgttgcgcgacaccggcctgaccattaccgaggtggcg
ctggccgccggtttcaacagtttgcggcgcttcaacaccctgttccgggggcgttatggg
cagccgccctcggcatggcgacgggccgcgtcagggcgtcgcaccagcgacggcgaattg
gtctttcatttgagctatcggccgccctttgattgggaggcgctgcgcgattttctcgcc
gcccgggccattcccggagtggaaggcatggagcggggacaataccggcgtaccgcgttg
atccggcgtggcgacaaagttcaccgtggctggctgaccgtggcgccggggccgcgcaac
ggactcacggtgacgttgtccgagtctctggcaccggtggtgccggaggtgttggttcgc
ttgcgccggctgttcgatctggacgcccagccggcgctggtggcgcaacggctgggttcg
ctggcggcggcgcggccggggctgcgggtgccgggggccttcgatggtttcgaagcggcg
gtgcgcgcggtgctgggacaacagatcacggtcaaggcggcgcgaactctggccggtcgg
gtggcggcgtcactgggcgagccgctggacacgccgttcgaggatctgaccaccaccttc
ccggaggccgccgtggtggccgccgccgaggcggagacgctgggattgctgggcatcatt
cgcgcccgggtgaaggcgatccaggcgctggccgctgcctgtgccgaggatcccatgctg
ctgtcgccggcggcggatgtggagcgtaccctgaccgagctcaaggctctgcccggcatt
ggtgactggaccgcccaatatctggcgatgcgggcgctgtcctggccggatgcgtttccc
gccgccgaccttggcgtgctcaaggcgttgggggagacttcggcggtggcggtgagacgg
cgggcggaggcctggcgcccctggcgcgcttatgcggtgatgcatctttggttcggtggc
caggaggacaagaccccatga
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