Alloalcanivorax dieselolei: B5T_01118
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Entry
B5T_01118 CDS
T02259
Symbol
rhlB
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5T_01118 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adi03019
]
B5T_01118 (rhlB)
Enzymes [BR:
adi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5T_01118 (rhlB)
Messenger RNA biogenesis [BR:
adi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B5T_01118 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AFT69401
UniProt:
K0CCW2
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All DBs
Position
complement(1204861..1206093)
Genome browser
AA seq
410 aa
AA seq
DB search
MRQDKTSDWDLDQFQVPEKEGEVRFHDFDLELPLMRGIAETGFQYCTPIQAEVLRHTLAG
ADAIGRAQTGTGKTAAFLITVINDLLRHPLTVPRYAGEPRALIVAPTRELAMQIEKDALQ
LARYTDLQVMSVVGGMNFNRQQERLQTRLIDILVATPGRLLDFAKRRDLWLDRVESLVLD
EADRMLDMGFIPDVKRIVRMTPPNRHRQTLLFSATFNEDVMALAQRWTEDPVTVEIEPAQ
VTTETVEQKVYITATEDKFNLLYNLIISENMEKVIVFANRRDITRRLNDRLVKKGLKVSL
ISGDVPQNQRMKTLERFRAGDLRVLIATDVAGRGIHIDGVSHVVNFNLPEDPEDYVHRIG
RTGRAGASGVSISFACEDDAFLLPQLEEAIGMKLPCEHPPAPLLEDQRQA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaagacaaaacaagcgattgggatctggaccagttccaggtaccggagaaagag
ggcgaggtccgttttcatgacttcgatctggaactgcctttgatgcgcggcatcgccgaa
acaggcttccagtattgcacgccgatccaggcggaggtcctgcgccacactctggccggc
gcggatgccatcgggcgagcccagaccggcaccggcaaaaccgccgcgttcctgatcacg
gtcatcaacgacttgttgcgtcaccctctgacggtgccccgctacgccggtgaaccgcgc
gctctgatcgtcgcgccgacgcgggaactggcgatgcagatcgagaaagatgccctgcag
ttggcccgttataccgacctgcaggtgatgagtgtggttggcggcatgaacttcaaccgt
cagcaggaacgcctgcaaacccgcctgatcgacatccttgtggccacccccggccgtctg
ctggatttcgccaaacgccgtgatctgtggctggaccgggtggaatcgctggtcctggac
gaagccgaccggatgctggacatgggcttcattcccgacgtcaaacgcatcgtgcggatg
acgccgccgaatcgccaccgccaaactctgctgttctccgccaccttcaatgaggacgtc
atggcgctggcccagcgctggaccgaggacccggtgacggtggaaatcgagccggcccag
gtgaccacggaaaccgtggagcaaaaggtctatatcaccgccacggaagacaaattcaat
ctgttgtacaacctgatcatcagcgaaaacatggaaaaggtgatcgtgttcgccaaccgc
cgggacattacccgccggctcaacgaccggctggtgaaaaagggcctgaaagtgtcgctg
atttccggtgacgtgccgcagaatcagcgcatgaagaccctggagcgcttccgcgccggc
gaccttcgggtattgatcgccaccgacgtggccggacggggcatccacatcgacggcgtc
tcccatgtggtgaacttcaatctgccggaagatcccgaggattacgtccatcgcatcggc
cgtaccggccgcgccggggccagcggcgtgtcgatcagtttcgcctgcgaggacgatgcc
ttcctgctgccgcaactggaagaagccatcggcatgaaattgccctgcgagcatccgccg
gcgccactactggaagaccagcgccaggcctga
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