Alloalcanivorax dieselolei: B5T_01936
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Entry
B5T_01936 CDS
T02259
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit subfamily, putative
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi03030
DNA replication
adi03430
Mismatch repair
adi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5T_01936 (dnaE)
03430 Mismatch repair
B5T_01936 (dnaE)
03440 Homologous recombination
B5T_01936 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adi03032
]
B5T_01936 (dnaE)
03400 DNA repair and recombination proteins [BR:
adi03400
]
B5T_01936 (dnaE)
Enzymes [BR:
adi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5T_01936 (dnaE)
DNA replication proteins [BR:
adi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5T_01936 (dnaE)
DNA repair and recombination proteins [BR:
adi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5T_01936 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AFT70211
UniProt:
K0CF40
LinkDB
All DBs
Position
2100257..2103760
Genome browser
AA seq
1167 aa
AA seq
DB search
MSEPRFVHLRLHTDYSLVDGVVRVKELIKTCTAQGMPAVAVTDENNLFALIKFYSNAQNA
GIKPVMGADLWVQADDPEDEPSYITCLVQNEQGYRNLTLLISRAWQTNQVRERALIRREW
LLELNEGLIVLSGARFGDVGKWLLAEKTDLARERATEYKTVFGDRYYLEVQRTQRPGDED
CLHASVALAAELDIPVVASNDVRFLKREDFEAHEARVCIHDGNTLDDPRRPRKYSEEQYL
KSAEEMAELFSDLPEALQNSVEIARRCTLDIRLGKNFLPDFPVPEGMTIEQYFEKVSRDG
LEERLVKILDPQAPDYAERRKIYDDRLKFELDIINQMGFPGYFLIVADFIQWGKEHQVPV
GPGRGSGAGSLVAYALKITDLDPIAYDLLFERFLNPERVSMPDFDVDFCMEKRDRVINYV
ADKYGRDAVSQIITFGTMAAKAVVRDVARVQGKPYGMADRLSKMIPGTPGMTLSKALEQE
ETLRDFLEDDGNPDKEAVNEIMEMAFKLEGLTRNVGKHAGGVVIAPGKLTDFAPLHCDEH
GENLVTQYDKDDVEQAGLVKFDFLGLKTLTIIDWAMKAVNVRRQREGDGPLEIERIPLDD
SPSFDLLKRGDTTAVFQLESQGMKELIKKLKPDVFEDIIALVALYRPGPLESGMVDNFIN
RKHGREPLAYPDPQYQHEWLESILKPTYGVILYQEQVMQIAQVLAGYTLGGADMLRRAMG
KKKPEEMAKQREIFESGAKEKGVDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVAYQTAW
LKAHYPAEFMAAVISADMQNTDKVVTFIDECHSMGLKVLPPDVNSCGYRFTVNPEGDIIY
GLGAIKGLGEGPIEAIVSARGDTDGFDDLFDFCRRIDLKKINRRSLEALVRAGALDKLGP
NRHFRDRATLLATLPDAIAAAEQDARNEEAGMTDLFGSMQTAETPVVEWKPAREWNDELR
LNGERDTLGLFLTGHPIDQFEHEVRQFVSARFNALQPTAKGEAATVAGLVVALRITRSKR
SGERMAFVTLDDKTGRLEVSVFGKTFAQFGERIQKDILLVVRGGVRNDDYSGGFNLVADE
VMDMRQAREVFARRLCVSVPVEQQLPDTLDRLFAPYRGGAIPVTLRLAHKEADVAMPLGD
EWKISPHEALVDELRNRFGETSVQLEY
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaccccgtttcgtccatttgcgattgcataccgactactccctggtggatggg
gtggtgcgggtgaaagaactgatcaagacctgcaccgcccagggcatgccggcggtggcg
gtcaccgatgagaacaacctgttcgcactgatcaagttctattccaatgctcagaatgcc
gggatcaaaccggtgatgggcgcggacctgtgggtgcaggcggatgatcctgaagacgag
cccagctatatcacttgcctggtgcagaacgaacagggctaccgcaatctgaccctgttg
atcagccgcgcctggcagaccaaccaggtgcgcgaacgggcgctgatccggcgcgagtgg
ctgctggagctcaacgaggggctgatcgtgttgtccggcgcccggtttggcgacgtgggt
aaatggctgctggcggagaagaccgatctggcgcgggaacgggccacggaatacaaaacc
gtatttggtgaccgttactacctggaggtgcaacgcacccagcgccccggcgatgaggac
tgcctgcacgccagcgtggcgctggcggcggagctggacattccggtggtggccagcaat
gacgttcgtttcctcaagcgcgaggatttcgaagcccacgaggcgcgggtctgtattcac
gacggcaacaccctggatgatccgcgccggccacgaaaatattccgaagagcagtatctg
aaaagcgcggaggaaatggcggagctgttttccgatctgccggaggcgctgcaaaacagc
gtcgagatcgcccgtcgctgcaccctggatattcgcctgggcaagaacttcctgccggat
ttcccggtgccggaaggcatgaccatcgagcagtacttcgagaaagtgtcccgggacggg
ctcgaggagcggttggtcaagattctcgatccgcaggcgccggactacgccgagcgccgc
aagatctacgatgaccgcctcaagttcgaactggacatcatcaaccagatgggtttcccc
ggttacttcctgatcgtggcggactttatccagtggggtaaggaacatcaggtgccggtg
ggacccgggcggggctccggcgccggctccctggtggcctacgcactgaagatcaccgac
ctcgatccgatcgcctacgacctactgttcgaacggttcctcaacccggagcgggtatcc
atgcccgacttcgacgtcgatttctgcatggaaaaacgcgaccgtgtgatcaattacgtg
gccgataaatacggccgtgacgcggtcagtcagatcatcactttcggcaccatggcggcg
aaggcggtggtgcgggacgtggcgcgcgtgcagggcaaaccctacggcatggccgaccgg
ctttcgaagatgattcccggcactccggggatgaccctgtcgaaggcactggagcaggaa
gaaacgctgcgggatttcctcgaggacgacggcaacccggacaaggaagcggtcaatgaa
atcatggagatggccttcaaactggagggcctgacccgaaacgtgggcaaacacgccggc
ggcgtggtgatcgcgccgggcaaactcaccgacttcgcgcccttgcactgcgacgagcac
ggcgaaaacctggtcacccagtacgacaaggacgacgtcgagcaagccgggctggtgaaa
ttcgactttctcggtctgaagacgctgaccatcatcgactgggcgatgaaagcggtgaac
gtgcgccgccagcgcgaaggggacgggccgctggagatcgagcggattccgctggacgat
tcgcccagcttcgatctgctcaaacgtggcgacaccaccgccgtattccagcttgaaagt
cagggcatgaaggagctgatcaagaagctcaagcccgacgtgttcgaggacatcatcgcc
ttggtggcgttgtaccggcccggtccgctggaatccggcatggtggacaacttcatcaac
cggaagcacggtcgggaaccgctggcctacccggatccgcagtaccagcatgaatggttg
gagtcgatcctcaagcccacctacggggtgattctctaccaggaacaggtgatgcagatc
gcccaggtcctggccggctataccctcggcggcgcggacatgctgcgccgcgccatgggc
aagaaaaaaccggaggagatggccaagcagcgggagatcttcgaaagcggcgcgaaagag
aagggtgtggacccggatctggcgatgaagatcttcgacctggtggagaagttcgccggt
tacggcttcaacaaatcccactccgccgcctacgccctggtggcctatcaaaccgcctgg
ctcaaggcccattacccggcggaattcatggcggcggtgatttccgccgatatgcagaac
accgacaaggtggtgaccttcatcgatgaatgtcactccatgggcctcaaggtactgccg
ccggatgtgaactcctgtggttatcgtttcacggtgaatccggaaggcgacatcatctat
ggcctgggcgcgatcaagggcctgggcgagggccccattgaggcgattgtcagtgcccgt
ggcgacactgacgggttcgacgatctgttcgacttctgccgccgtatcgacctgaagaag
atcaatcgccgttccctggaagccctggtgcgtgccggagccctggacaagctagggccg
aaccgtcatttccgtgatcgcgccacgttgttggccactttgccggatgccatcgccgcg
gcggaacaggacgcccgcaacgaagaagccggcatgacggatttgtttggctccatgcag
accgccgaaaccccggtggtggagtggaagccggcccgcgagtggaatgacgaactgcgt
ctcaacggcgagcgcgataccctgggcctgttcctgaccggtcaccccatcgaccagttc
gaacacgaggtccggcaattcgtcagcgcccgcttcaatgccctgcaacccaccgccaag
ggcgaggccgccacggtggccgggctggtggtggcgttgcgtattacccgcagcaagcgc
agcggtgagcgcatggccttcgttaccctggatgacaagaccggccggctggaagtatcg
gtgttcggcaagacctttgcccagttcggtgagcgtatccagaaggacattctgctggtg
gtacgcggcggagtccgtaacgacgattactccggcggctttaatctggtggccgacgag
gtcatggacatgcgccaggcccgcgaggtgttcgcccgccgcctgtgcgtgtcggtgccg
gtggagcagcaactgccggacaccctggaccggttgtttgcgccgtaccggggcggggcg
atcccggtgacgttgcggctcgctcacaaggaagcggatgtggccatgccgcttggcgat
gagtggaaaatcagcccccacgaagccctggtggatgagctgcgcaaccgcttcggcgag
acgtcggtgcagttggagtattag
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