Alloalcanivorax dieselolei: B5T_01990
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Entry
B5T_01990 CDS
T02259
Name
(GenBank) RNA polymerase sigma-70 factor, putative
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B5T_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adi03021
]
B5T_01990
Transcription machinery [BR:
adi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B5T_01990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
MarR
HTH_20
GerE
TnsD
HTH_10
HTH_11
PhyR_sigma-like
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AFT70264
UniProt:
K0C9S6
LinkDB
All DBs
Position
complement(2161387..2161896)
Genome browser
AA seq
169 aa
AA seq
DB search
MSGTKLARQADIHAIYSDHQGWLQNWLRRKLGNHHDAADLTHDTFLRLIAGHRDVSRLGD
EPRALLTHIARCLVIDHWRRRDVEQAYLNAIAHLPAAEAPSPETRWLILEALYRIDAMLR
DLPALTRRIFLLSQLDGLKYQDIAERMAVSLPTVKRHMRKAFLACLSLE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgggcaccaaattggcacgacaagctgatatccatgccatttatagtgatcatcag
ggctggctgcagaactggttgcgccgcaagctcggcaatcatcatgacgcggcggatctc
acccacgacacctttctgcggctgatcgccggtcaccgggatgtgtcacggcttggcgat
gagcctcgtgctctgctgactcacattgcccgctgtctggtcatcgatcactggcgccgg
cgggatgtggaacaggcctacctgaacgccatcgctcacttgcccgccgccgaagcgccg
tcaccggaaacccgctggctgatcctggaagcgctgtaccggatcgatgccatgttgcgc
gatcttcccgcgctcactcgccggatttttcttttgtcccagctcgacggcctgaaatac
caggatatcgccgagcggatggcagtttctctacctaccgtcaaacggcatatgcgcaag
gcctttctggcctgcctgagcctggaatag
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