Alloalcanivorax dieselolei: B5T_02725
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Entry
B5T_02725 CDS
T02259
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi03030
DNA replication
adi03430
Mismatch repair
adi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5T_02725 (holB)
03430 Mismatch repair
B5T_02725 (holB)
03440 Homologous recombination
B5T_02725 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adi03032
]
B5T_02725 (holB)
03400 DNA repair and recombination proteins [BR:
adi03400
]
B5T_02725 (holB)
Enzymes [BR:
adi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5T_02725 (holB)
DNA replication proteins [BR:
adi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B5T_02725 (holB)
DNA repair and recombination proteins [BR:
adi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B5T_02725 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
AAA
AAA_5
QueC
Motif
Other DBs
NCBI-ProteinID:
AFT70994
UniProt:
K0CBQ0
LinkDB
All DBs
Position
complement(3030827..3031837)
Genome browser
AA seq
336 aa
AA seq
DB search
MSKAPVQVPCPWHQEEMARLLDQHQRERLPHALLLAGPEGIGKYRLAQSLMQTLLCRQPS
AGVACGQCEACHLSTAGTHPDMHVLTPEGGSRAIKIDQVRRLVEFCSRTAQFGGGRLALL
SPAEALNRSAQNALLKTLEEPGPGMTLILVSHQPSLLLPTVRSRCQQRLLPVPAADQALS
WLTPQVGEVAPALLDAAQGAPLKALVLQDADWFSDRRRLAEQVLRVAQGRLSPAQGAQAL
AAFEPDTMARILYGWLARATRLAALGGAAIPAGEGDAQLEPLLRQLADTVPVARLMRATQ
RIQEGRRQILAGANPNKELLMEQWMLVLVGVDAALQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcgccggtacaggtaccctgtccctggcatcaggaggagatggcgcggctg
ctggatcagcaccagcgtgagcgtttaccccatgccctgttgctggccggtcccgaaggc
atcggcaaataccggctggcgcagtcgttgatgcagacgctgttgtgccggcaacccagc
gccggcgtggcctgtggccagtgcgaggcgtgccatctgagtaccgccggtacccacccg
gacatgcacgtgctgacaccggaaggaggcagccgcgcgatcaagatcgatcaggtgcgg
cgcctggtggagttctgctcccgcaccgcccagttcggcggcgggcggctggcgctgttg
tccccggcggaagcgctcaaccgcagtgcgcagaacgcgctgctcaagactctggaagag
ccgggaccgggcatgaccctgattctggtcagccatcagcccagcctgctgctgcccacc
gtgcgcagccgttgccagcaacggttgttgccggtgcccgccgccgatcaggcgctctcc
tggttgacgccacaggtcggggaggtggcaccggcattactggacgcggcccagggcgcg
cctttgaaagcgctggtgctgcaggacgcggactggttcagtgatcgccgtcgtctcgcc
gagcaggtattgcgagtggcccaggggcgtctgtctccggcccagggggcgcaggccctg
gcggcgttcgagccggacaccatggcgcggatattgtatggttggttggcccgggcgacg
cggttggcggcgcttgggggcgcggccatacccgccggcgaaggcgatgcgcaactggag
ccgctgctgcggcagctggccgataccgttccggtggcgcggttgatgcgcgccacccaa
cggattcaggaaggccgccggcagatcctggccggcgccaacccgaacaaggaattgctc
atggagcaatggatgctggtgctggtgggcgtggacgccgccttgcagtaa
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