Alloalcanivorax dieselolei: B5T_02973
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Entry
B5T_02973 CDS
T02259
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
adi
Alloalcanivorax dieselolei
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adi03032
]
B5T_02973 (ihfB)
03036 Chromosome and associated proteins [BR:
adi03036
]
B5T_02973 (ihfB)
03400 DNA repair and recombination proteins [BR:
adi03400
]
B5T_02973 (ihfB)
DNA replication proteins [BR:
adi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B5T_02973 (ihfB)
Chromosome and associated proteins [BR:
adi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
B5T_02973 (ihfB)
DNA repair and recombination proteins [BR:
adi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
B5T_02973 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AFT71241
UniProt:
K0CI54
LinkDB
All DBs
Position
complement(3294416..3294802)
Genome browser
AA seq
128 aa
AA seq
DB search
MASALTKSKLIARIARTYTSNDLSTKDVELAIKALIDYMADAMVEGERIEIRGFGSFSLH
FRAPRVGRNPKTGASVELQGKYVPHFKCGKDLRERVNRAMQDDDGGDHNEHRSERRHHAS
HSAKAIRG
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcgttaaccaagtccaaactcatcgctcggatcgccagaacttacaccagc
aatgatctctccaccaaggacgtggaactcgccatcaaagccctgatcgactacatggcc
gacgccatggtagaaggcgaacgcatcgagattcggggtttcggcagcttctccctccat
ttccgcgcaccgcgcgtgggccgtaatccgaagaccggcgccagcgtggagttgcaaggc
aaatacgttccccacttcaaatgcggcaaggacctgcgtgaacgggtcaatcgtgccatg
caggacgatgacgggggcgaccataacgagcaccggagcgagcggcgccaccatgccagc
cacagcgccaaggccatccggggctga
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