Alloalcanivorax dieselolei: B5T_03149
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Entry
B5T_03149 CDS
T02259
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B5T_03149 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adi03400
]
B5T_03149 (recD)
Enzymes [BR:
adi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B5T_03149 (recD)
DNA repair and recombination proteins [BR:
adi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B5T_03149 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
PhoH
UvrD-helicase
SLFN-g3_helicase
AAA_5
AAA_16
AAA_28
T2SSE
PIF1
AAA_7
nSTAND3
DEAD
NTPase_1
AAA_17
ATPase
Motif
Other DBs
NCBI-ProteinID:
AFT71416
UniProt:
K0CIM1
LinkDB
All DBs
Position
3496420..3498366
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AA seq
648 aa
AA seq
DB search
MRSDGQGDLFAAVDWQSALEQVRDQGQLRDLDVAVARFLHQQAPDTDPVVLVIAALTSAQ
LAAGHLCLDLEEPELAQRLWPAGIPESLVPLLPPDPQQWHAPLRASELVGEGSGQPLVLD
GSRLYLQRNWTQEVKVADLLLARLRHETSAPPGDTLAKLFVDGDDEVDWQQVACALATRA
RLTVITGGPGTGKTTTVVRLLGLLQSLALEQGRTLRIRLAAPTGKAATRLTQSIGDQVAR
LPLPQTVRSAIPTEVSTLHRLLGTRPDSRRFRHHRHNPLHADLVVVDEASMIDMEMMASL
LDALDANTRLVLLGDKDQLASVEAGAVLGDLCRDADRGGYDETTVDFIQQNCGADLTAWR
GDGGPLAQQTAMLRRNWRFRDSPGIGALARAVNQGDNRSVTSVFRQHTDQLQRLDLRRDP
HYLHRFLIDGTASHPGLKALLLEAANTPDRDELDSWAARLLLRLTERQLLSGLRGGPFGV
TELNQQLTRQLHRQGLADEHEWYPGRPVMLTHNDYQLGLMNGDVGLTLAHPDGLRVAFPL
PDGRIKWVLPSRLGGVETVYAMTVHKSQGSEFRHTLLILPDRPHPLLTRELIYTAVTRAR
ETFTLLECGPGTVLNQAVARRTWRASGLWQRLNRTERQVITDDDDSCR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtgatggacaaggcgatctgttcgccgccgtcgactggcaaagtgccctggag
caagtgcgcgatcaggggcagttacgggatctggacgtggcggtggcgcggtttctgcac
cagcaggcaccggacaccgatccggtggtcctggtgatcgccgcgctcaccagcgcgcaa
ctggcggcggggcatctgtgtctggacctggaggaaccggagttggcccaacggctatgg
ccggcgggcataccggagagtctggtgccgttattgccgccggacccgcaacagtggcac
gcaccgctgcgagccagtgagctggttggcgagggctccggtcagcccctggtgctggac
ggttcccgtctctacctgcagcgcaactggacccaggaggtcaaggtcgccgacttactg
ctggcgcgactgcggcacgagacttccgcccctccgggcgacactctggcaaagctgttc
gtcgacggcgatgacgaggtggactggcagcaggtggcctgcgccctggccacccgtgcc
cgcttgacggtgatcaccggcggccccggcaccggcaagaccaccaccgtggtgcgcctg
ctgggtctgctgcaaagcctggcactggaacagggacgcaccctgcgtatacgtctggcc
gcccccaccggcaaggccgccacccggctgacgcagtccatcggcgatcaggtggcgcgg
ctgccgttgccgcaaaccgtgcgctcggccattcccaccgaggtcagcactctgcaccgc
ctgctcggcacccgccctgacagccgccgcttccgtcatcaccggcataacccgctgcac
gcggatctggtggtggtggacgaagccagcatgatcgacatggaaatgatggccagtctg
ctcgacgccctggatgccaatacccggctggtgctgctgggcgacaaggaccaactggcc
agcgtggaagccggcgcggtcctcggtgacctttgccgcgacgccgatcggggcggctac
gacgagaccacggtggacttcattcaacaaaactgcggcgccgacctgaccgcctggcgc
ggcgacggcggccccttggcgcaacagaccgccatgctgcgacgcaactggcgcttccgc
gacagccccggcatcggcgcactggcccgggcggtgaatcaaggtgataaccggagtgtc
accagcgtcttccgacaacatacggatcaactacagcgcctggacctgcgccgcgatccc
cactatctgcaccgtttcctgatcgacggcacggcctcgcatccggggttgaaagcgctg
ctgctcgaagcggccaacacaccggacagggacgaactggatagctgggccgcccggctg
ctgctccggttaaccgagcggcagttgttgagcggcttgcgcggcggccctttcggcgtc
accgagctgaatcagcaactgacccggcaactgcaccggcagggcctggcggacgagcac
gaatggtatccgggccgtccggtgatgcttactcacaacgattatcagcttggtctgatg
aacggcgacgttggcctgaccctggcccacccggatggcctgagagtggcatttccgtta
ccggatggccgcatcaagtgggtattgccgagccggctgggcggcgtggaaacggtctac
gcgatgaccgtgcacaaatcccagggctcggagttccgacacaccctgctgatccttcca
gaccggccgcatccgctgctaacccgggagctgatctataccgcggtgacccgggcgcgg
gagaccttcaccctgctcgagtgcggcccgggcacggtgctgaaccaggcggtcgcccgc
cgcacctggcgcgcatcggggttatggcaacgactgaaccgcaccgaacggcaggtcatc
accgatgacgacgactcttgccgctga
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