Alloalcanivorax dieselolei: B5T_03842
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Entry
B5T_03842 CDS
T02259
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase subfamily
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
adi
Alloalcanivorax dieselolei
Pathway
adi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B5T_03842 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adi03019
]
B5T_03842 (pcnB)
Enzymes [BR:
adi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
B5T_03842 (pcnB)
Messenger RNA biogenesis [BR:
adi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B5T_03842 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AFT72104
UniProt:
K0CES8
LinkDB
All DBs
Position
4261374..4262759
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AA seq
461 aa
AA seq
DB search
MASKLLEKLTRLIQFGSPRTPRLPKAKVIPRDAHPISRKQVSRAALNVLYGLHKAGFEAY
LVGGCLRDLLCGRQPKDFDVVTDATPEQVYRLFKRSRIIGRRFQIVHVRFGGEVIEVSTF
RAFQRDDDLDDDQHRAHEETGLVLRDNTWGNIEEDALRRDFTINALYYNIADFALYDFVN
SRQDIERGIIRLIGDPQQRYREDPVRMLRAARFAAKLGFQLDRATRAPIPEMASLLLQVP
PARLFDEVLKLFLSGHARDSFEQLRKLGLFAFLFPNTHEALESEQGEVWERLILAAMDNT
DRRLSENKPVTPAFLYAVFLWPVLVTQLNRYREDGIPPAPALHKAATWALNEQSHHTSVP
RRFSSVMREMWDLQPRLDKRNGKRADTLMEHPRFRAAYDFLLLREQAGEIKPGLGEWWTR
YQAADESQQRAMVQDLGQPDRQGGRRRRRRRRSGGGGDSEA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaagcttctggagaaactgacccgccttattcagtttggttccccacgtacg
ccccgccttcccaaggccaaggtgattccccgcgacgcccaccctatttcccgtaaacag
gtgtcccgggccgcgctcaatgtactctacggactgcataaggccgggttcgaagcctat
ctggtcgggggatgcctgcgggatctgctatgcgggcggcaacccaaggatttcgacgtg
gttaccgacgccaccccggagcaggtctaccggctgttcaagcgcagccgcatcatcggc
cgccgtttccagatcgtgcacgtgcgtttcggtggcgaggtcatcgaagtgtccaccttc
cgcgcgttccagcgggatgatgatctggatgacgatcagcaccgggcccatgaggaaacc
ggcctggtgctgcgagacaacacctggggcaacattgaggaagacgcgctgcgccgcgac
ttcaccatcaacgccctctattacaatatcgccgatttcgccctgtatgatttcgtcaac
agccggcaggacatcgagcgcggcatcatccggttgatcggagatcctcagcaacgctat
cgcgaggatccggtacgcatgctgcgcgccgcccgcttcgccgccaaactgggctttcag
ctggatcgcgccacccgggcgcccattcctgagatggcgtcgctgttactgcaggttccg
cccgcccgcctgttcgacgaagtgctcaagctgttcctcagcggtcatgcccgggattcc
tttgaacagctgcggaagctgggtttgtttgcctttttgttccccaacacccacgaagcg
ttggaaagtgagcagggagaagtctgggaacggctgatcctggccgccatggacaacacc
gaccggcgcctgtccgagaacaagccggttaccccggccttcctttacgcggtgtttctg
tggccggtgctggtcacacaattgaatcgctatcgcgaggatggcattccgccagcgccg
gccttgcataaagccgccacctgggctcttaacgagcaaagccatcacacctcggtgcct
cgccgcttctcctcggtgatgcgcgaaatgtgggacctgcagccgcgcctggacaaacgc
aatggcaagcgggcggataccctgatggagcacccccgcttccgtgccgcttacgacttc
cttctgctgcgcgaacaggccggtgaaatcaaacccggactgggagaatggtggacccgc
tatcaagccgccgacgagtcccagcaacgcgccatggttcaggatctgggccagcccgac
cgccaaggcggccggcggcgtcggcggcgccgtcgcagcgggggcggaggcgacagcgaa
gcatga
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