Alloalcanivorax dieselolei: B5T_03856
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Entry
B5T_03856 CDS
T02259
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adi
Alloalcanivorax dieselolei
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adi03016
]
B5T_03856 (truB)
Enzymes [BR:
adi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B5T_03856 (truB)
Transfer RNA biogenesis [BR:
adi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B5T_03856 (truB)
Prokaryotic type
B5T_03856 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AFT72118
UniProt:
K0CHM9
LinkDB
All DBs
Position
complement(4276855..4277724)
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AA seq
289 aa
AA seq
DB search
MDKADGVTSNGALQMAKRMFAAAKAGHTGSLDPLATGMLPVCFGEATKFSQFLLDADKRY
RVTARLGVTTETGDADGEVVETRPVSVTEAQVLTALDRFLGEIEQVPSMYSAIKHNGTPL
YKLAREGITVERAPRRVTIHEIREARLDGEDLTFEVACSKGTYVRSLVEDLGAVLGCGGH
VIALRRLSAGPYPEERMITLEQLGLLKEQGGFEAIDDLLLPLSTSVADWPRVNLGDNAAY
YLRQGQPVMASDRPAEGWVSLYQASTEQFLGVGEVLEDGRIAPRRLVSE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttggacaaagccgatggcgtgaccagcaacggtgctttgcaaatggccaagcgcatgttt
gccgcggccaaggccgggcacaccggtagcctggatccgctcgccaccggcatgttgccg
gtgtgcttcggtgaggcaaccaaattcagtcagtttctgctcgacgcggataaacgctac
cgggtcaccgcccgtcttggcgtgaccacggaaaccggcgacgccgacggtgaggtggtg
gaaacccgcccggtatcggtcaccgaagctcaggttctgaccgcgctggaccgcttcctg
ggagaaatcgagcaggtgccgagtatgtactcggcgatcaagcacaatggcacaccgctg
tataagctggcgcgggaaggtattaccgttgagcgcgcgccgcgccgggtgaccattcac
gaaattcgcgaggcgcgcctggatggcgaggacctgacgttcgaggtggcctgttccaag
ggcacttatgtgcgctccctggtggaagacctgggtgcggtgcttggctgcggtggccac
gtgatcgccctgcggcgcctgtccgctggcccctatccggaggaacggatgattaccctg
gagcagttggggctgctcaaggagcagggtggattcgaggcaattgatgatttgctcttg
cctttatccaccagcgtggcagactggccgcgcgtcaatctgggtgacaacgcggcgtat
tatctgcgccagggccagccggtgatggccagtgaccgcccggccgagggctgggtcagt
ctttatcaggcttccacggagcagttcctgggggtcggagaagtactggaggatgggcga
atagcgcctcgtcgtctggtatcggagtga
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