Alloacidobacterium dinghuense: H7849_00365
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Entry
H7849_00365 CDS
T08177
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
adin
Alloacidobacterium dinghuense
Pathway
adin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7849_00365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adin03019
]
H7849_00365
Messenger RNA biogenesis [BR:
adin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H7849_00365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Pro-NT_NN
DUF3813
Motif
Other DBs
NCBI-ProteinID:
QNI32523
UniProt:
A0A7G8BJ03
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All DBs
Position
complement(91698..93359)
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AA seq
553 aa
AA seq
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MADAKLQIIPLGGLGEFGMNCLAIRYKDDIIVIDAGLMFPESELLGVDIVVPDITYLVEN
REHVRGIVLTHGHEDHIGGLPWILSELNVPVYGTEFTLAYVEGKLEEHKLLDDTELIEIA
PGSKFSLGPFTIEPIRVTHSLVDCVALAIDTPVGVIVHTGDFKIDLSPPDSKAFDLHKFA
EYGQRGVLALLQDSTNVDRPGYTPSEWSVKPRLDELFSRTKKKLFFSCFSSSIYRIRIAI
DLAHTHGRKVAIVGRSMVESSEIAQDLGYLEVPPGIIIHPGQIADYDPEEVMILISGTQG
EPMSALSRAAVDNHKHARILPGDTVVLSSRVIPGNEKSIFRVIDHLYRRDAHVIFDDGAS
GLIHVSGHASQEEQRLMINLLRPKFFIPVHGDYRHLKKHAEMAQNMGVVDLALVIENGDV
LELDQDDARKTGKITAGRVCIDSGSTADVVEDLVIRDRRHLSEDGFVLPILTINKLSGKV
ERLPEIVSRGFVGADQELMEAARNVVSQTLENSSDEEKADYGVIKEKIRIDLKRYIQKNT
SRRPLIMPVILEI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcaaaactgcaaattattccgctgggcggattaggcgagttcggcatgaac
tgtctcgccatccgctacaaagacgacatcattgtcatcgatgccggtctcatgttcccc
gagtccgagttgttgggcgttgatatcgtcgttcctgatatcacatacctcgtagagaac
cgcgagcatgtgcgcggcatcgtgctcacacacggacacgaagatcacattggggggctg
ccctggatcctctccgagttgaacgtccccgtatatggtacggagtttacgcttgcctat
gtcgaaggcaagctcgaagaacacaagctgctcgatgacacagaactgatcgagatcgcg
cccgggtcgaagttctcgcttggacctttcaccatcgagccgatccgcgtaacccacagc
ctggtggactgtgtcgcgctcgcgattgatacgccggttggcgtcatcgttcacacaggc
gacttcaagatcgatctttccccaccagacagcaaggccttcgacctccataaatttgcg
gaatacggccaacgcggtgttctcgccttgctgcaggattcgacgaatgtggaccgtccc
gggtacacgccgagcgagtggtcggtgaagccgcgccttgacgagctgttttcgcgcaca
aagaaaaaacttttctttagttgcttttcgtcgtcaatctaccgcattcgcatcgccatc
gacctggcacacacgcacggacgcaaggtcgcaattgtcggaaggtcgatggtcgaatca
tccgagattgctcaggatcttggatacctcgaggtgcctccgggcatcatcatccatccg
ggccaaattgccgattacgaccccgaggaagtgatgatcctgatcagcggcacgcagggg
gagccaatgagcgcgttaagccgcgccgctgttgataaccacaaacatgcacgcattctc
cccggcgatacggtagtgcttagttcgcgtgtgattcccggtaacgagaaaagcatcttc
cgagtcatcgatcacctgtatcggcgcgatgcacatgtcatcttcgacgatggcgcttca
ggcctgattcacgtgagcgggcacgccagccaggaagagcagcggttgatgatcaatctc
ctgcggccaaagttttttatcccggtgcatggagattacagacatctgaagaagcacgcc
gagatggcgcagaacatgggcgttgtcgatcttgcactggtgattgagaacggcgacgtt
ctcgaactcgatcaggatgatgcgcgcaaaactgggaaaattactgcggggcgcgtctgc
atcgactctggatcaactgccgatgtggtcgaagacctcgtcatccgcgaccgacgccat
ctgagcgaagacggatttgtgctgccgattctcactatcaacaaactcagcggcaaagta
gagcgcctgccggagattgtaagccgtggttttgtgggagccgatcaggagttgatggaa
gcggcgcgcaatgtcgtcagccagacgctcgaaaattcgagcgatgaggaaaaggccgat
tacggagtaatcaaggaaaagatccgcatcgatctgaagcgctatatccagaaaaatacc
agccggcgaccgttgatcatgccggtaattcttgagatttga
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