KEGG   Alloacidobacterium dinghuense: H7849_00365
Entry
H7849_00365       CDS       T08177                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
adin  Alloacidobacterium dinghuense
Pathway
adin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H7849_00365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adin03019]
    H7849_00365
Messenger RNA biogenesis [BR:adin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H7849_00365
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Pro-NT_NN DUF3813
Other DBs
NCBI-ProteinID: QNI32523
UniProt: A0A7G8BJ03
LinkDB
Position
complement(91698..93359)
AA seq 553 aa
MADAKLQIIPLGGLGEFGMNCLAIRYKDDIIVIDAGLMFPESELLGVDIVVPDITYLVEN
REHVRGIVLTHGHEDHIGGLPWILSELNVPVYGTEFTLAYVEGKLEEHKLLDDTELIEIA
PGSKFSLGPFTIEPIRVTHSLVDCVALAIDTPVGVIVHTGDFKIDLSPPDSKAFDLHKFA
EYGQRGVLALLQDSTNVDRPGYTPSEWSVKPRLDELFSRTKKKLFFSCFSSSIYRIRIAI
DLAHTHGRKVAIVGRSMVESSEIAQDLGYLEVPPGIIIHPGQIADYDPEEVMILISGTQG
EPMSALSRAAVDNHKHARILPGDTVVLSSRVIPGNEKSIFRVIDHLYRRDAHVIFDDGAS
GLIHVSGHASQEEQRLMINLLRPKFFIPVHGDYRHLKKHAEMAQNMGVVDLALVIENGDV
LELDQDDARKTGKITAGRVCIDSGSTADVVEDLVIRDRRHLSEDGFVLPILTINKLSGKV
ERLPEIVSRGFVGADQELMEAARNVVSQTLENSSDEEKADYGVIKEKIRIDLKRYIQKNT
SRRPLIMPVILEI
NT seq 1662 nt   +upstreamnt  +downstreamnt
atggccgacgcaaaactgcaaattattccgctgggcggattaggcgagttcggcatgaac
tgtctcgccatccgctacaaagacgacatcattgtcatcgatgccggtctcatgttcccc
gagtccgagttgttgggcgttgatatcgtcgttcctgatatcacatacctcgtagagaac
cgcgagcatgtgcgcggcatcgtgctcacacacggacacgaagatcacattggggggctg
ccctggatcctctccgagttgaacgtccccgtatatggtacggagtttacgcttgcctat
gtcgaaggcaagctcgaagaacacaagctgctcgatgacacagaactgatcgagatcgcg
cccgggtcgaagttctcgcttggacctttcaccatcgagccgatccgcgtaacccacagc
ctggtggactgtgtcgcgctcgcgattgatacgccggttggcgtcatcgttcacacaggc
gacttcaagatcgatctttccccaccagacagcaaggccttcgacctccataaatttgcg
gaatacggccaacgcggtgttctcgccttgctgcaggattcgacgaatgtggaccgtccc
gggtacacgccgagcgagtggtcggtgaagccgcgccttgacgagctgttttcgcgcaca
aagaaaaaacttttctttagttgcttttcgtcgtcaatctaccgcattcgcatcgccatc
gacctggcacacacgcacggacgcaaggtcgcaattgtcggaaggtcgatggtcgaatca
tccgagattgctcaggatcttggatacctcgaggtgcctccgggcatcatcatccatccg
ggccaaattgccgattacgaccccgaggaagtgatgatcctgatcagcggcacgcagggg
gagccaatgagcgcgttaagccgcgccgctgttgataaccacaaacatgcacgcattctc
cccggcgatacggtagtgcttagttcgcgtgtgattcccggtaacgagaaaagcatcttc
cgagtcatcgatcacctgtatcggcgcgatgcacatgtcatcttcgacgatggcgcttca
ggcctgattcacgtgagcgggcacgccagccaggaagagcagcggttgatgatcaatctc
ctgcggccaaagttttttatcccggtgcatggagattacagacatctgaagaagcacgcc
gagatggcgcagaacatgggcgttgtcgatcttgcactggtgattgagaacggcgacgtt
ctcgaactcgatcaggatgatgcgcgcaaaactgggaaaattactgcggggcgcgtctgc
atcgactctggatcaactgccgatgtggtcgaagacctcgtcatccgcgaccgacgccat
ctgagcgaagacggatttgtgctgccgattctcactatcaacaaactcagcggcaaagta
gagcgcctgccggagattgtaagccgtggttttgtgggagccgatcaggagttgatggaa
gcggcgcgcaatgtcgtcagccagacgctcgaaaattcgagcgatgaggaaaaggccgat
tacggagtaatcaaggaaaagatccgcatcgatctgaagcgctatatccagaaaaatacc
agccggcgaccgttgatcatgccggtaattcttgagatttga

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