Alloacidobacterium dinghuense: H7849_00735
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Entry
H7849_00735 CDS
T08177
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
adin
Alloacidobacterium dinghuense
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adin03032
]
H7849_00735 (topA)
03400 DNA repair and recombination proteins [BR:
adin03400
]
H7849_00735 (topA)
Enzymes [BR:
adin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H7849_00735 (topA)
DNA replication proteins [BR:
adin03032
]
Prokaryotic type
DNA Topoisomerases
H7849_00735 (topA)
DNA repair and recombination proteins [BR:
adin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H7849_00735 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DNA_ligase_ZBD
Zn_ribbon_8
Zn_Ribbon_TF
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNI32587
UniProt:
A0A7G8BJ67
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All DBs
Position
complement(190908..193508)
Genome browser
AA seq
866 aa
AA seq
DB search
MSKALVIVESPAKAKTISKYLGKDYTVEASVGHIKDLPKNKIGVDLEDGTFEPELIVIPG
KEKVVDRLKKLAAKSDQVYLAPDPDREGEAIAAHLADELSKVVKKNAIHRVTFNEITPKA
VKDAFQHARNVDSHLVDAQTTRRVLDRIVGYQVSPLLWDKVRRGLSAGRVQTVAVRLIVE
REREIKAFNPVEYWTIDAELEAQESTPFTARFIGIDGQRAKVETVDAPSLPDQQITDEVI
AQLKKATWSVRGVESKERKRNSTAPFTTSKLQQDAARRLGFNVKRTMGVAQRLYEGVEIG
SETVGLITYMRTDSTRVAPEAITNVREWIKKKLGAPYLPATPNTFKSKKDAQDAHEAIRP
TDVNHHPDEIRRYLSDEQYKLYKLIWQRFVASQMMPAVFDQTTVDIAAKANRNYDFRVTG
SVLKFDGFLKVYEEAKDKKDEDDEALANKLPALNEGQSLKLHELKPEQHYTEPPPRYNEA
SLVKELEEQGIGRPSTYASIINTIQDREYVQKIGGRSGRFVPTEIGTVVTDLLVKNFPYI
FDTKYTARLEEELDDIEDGREKWTDLLSGFYGHFAEELVDASKHMEDIKRMEKATDEKCP
LCGSPLVLKWGKFGSFYACSSYDKKKKDSCTYTRENFEAKPNLQTEGQDAEQEEEYCENC
GRVMVLRNGPWGPYMACPGYNEDPPCKTVRRLHQKQQQKPPEPVDEMCPKCGSQLVKRIG
QYGEFISCSAYPKCKYIKQNTIGVVCPKCKDGQIVEKKARRGNLFYGCENYPKCDFTANY
KPVDKKCPECGSPYLMEKTLKSGVYLVCPNNKKPTAADEEETTKKRKKKGEEESGVACSY
SKRIADAPVAEKPTVETHGPLVEQAV
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcgcttgtgatcgtcgaatcccccgcgaaagcaaagacgatcagcaaatat
ttgggcaaggactacaccgtcgaagcatcggtcggacatattaaggaccttcccaaaaac
aaaatcggtgtcgatcttgaagacggaaccttcgagccggagctgatcgttatccccggc
aaagagaaagtcgtcgaccgcctcaagaagctcgctgcaaaatccgaccaggtctatctc
gcgcctgaccctgaccgcgaaggcgaagccattgctgcgcaccttgccgacgagttgagc
aaagtggtcaagaagaacgcgatccatcgcgtcactttcaacgagatcacgcccaaagcc
gtgaaagacgcctttcagcacgcccgcaatgttgactcgcatctggtcgacgcgcagact
acgcgccgcgtccttgaccgcatcgtaggctaccaggtctcgccgctactatgggacaaa
gtgcgccgcggcctctccgccggacgcgtgcaaaccgttgctgtacgcctcattgtcgag
cgcgagcgcgaaatcaaggccttcaacccagtcgaatactggaccatcgacgccgaactc
gaagcacaagaatcaactccgtttactgcgcgattcatcggcatcgacggccagcgcgca
aaagtcgaaacagtcgacgcgccatctctgcctgatcagcaaatcaccgacgaagtcatc
gcgcagctaaaaaaagcaacatggtccgtccgcggtgtcgaaagcaaggagcgcaagcgc
aactccaccgcgccgttcaccaccagcaagctgcagcaggacgccgcgcgtcgcctcggc
ttcaacgtcaagcgcaccatgggcgtcgcgcagcgtctctacgaaggcgtcgaaatcggc
agcgaaaccgtcggcctcatcacctacatgcgtaccgactcgacgcgcgtcgcgcccgaa
gccatcaccaacgtccgcgagtggatcaagaagaaactcggcgcgccctatctgcccgcc
acacccaacaccttcaagtcgaagaaggacgcgcaagacgcacacgaagcaattcgtccg
accgatgtgaatcatcatcccgacgaaatccgccgctacctgagcgacgagcagtacaag
ctgtacaagctcatctggcagcgcttcgtcgcatcgcagatgatgcccgcagtcttcgac
cagaccaccgtcgatatcgccgccaaggccaatcgaaactatgactttcgcgtcaccggc
tcagtgctcaagtttgacggcttcctcaaggtctacgaagaagcgaaggataaaaaggac
gaagacgacgaagccctcgcgaacaaacttcctgcgctcaatgaaggtcagtcgctcaag
ctccacgagttgaagcccgagcagcattacaccgagccgcctccgcgctataacgaagcc
tcgctcgttaaggaactcgaagagcaaggtatcggccgcccgtccacctatgcgtccatc
attaatacaattcaggaccgtgagtacgtgcagaagatcggcggtcgttcgggccgtttc
gttcccacagaaatcggcactgtcgtcactgatctgctggtgaagaacttcccctatatc
ttcgacacgaagtacacagcgcgcctcgaagaagaactagacgacatcgaagatggccgc
gaaaagtggaccgacttactcagtggcttctacggccacttcgccgaagagctcgtagat
gccagcaagcatatggaagacatcaagcggatggagaaggccacggacgagaagtgtccg
ctctgcggctcgccgctggtgctgaagtggggcaagttcggctccttctatgcctgcagt
tcctacgacaagaagaaaaaagacagctgcacctacacgcgcgaaaatttcgaggcaaag
cccaaccttcagaccgagggtcaggatgccgagcaggaagaagaatactgcgaaaactgc
ggtcgcgtaatggtgttgcgcaacggcccctggggtccgtatatggcctgccccggctat
aacgaagacccgccttgcaagaccgtacgccgcttgcatcagaaacagcagcagaaaccg
cccgagccagtcgacgagatgtgcccgaagtgcggcagccagctcgtcaaacgcataggc
cagtacggtgagttcatctcctgctcggcgtaccccaagtgcaagtacatcaagcagaac
accatcggcgtcgtctgcccgaagtgcaaagatggccagattgtcgagaaaaaagcgcgc
cgcggcaacctcttctacggttgcgaaaactacccgaagtgcgacttcacggccaactac
aagccggtcgataagaagtgcccggaatgcggatcgccttatctgatggagaagaccctc
aagtccggtgtctaccttgtctgcccgaataacaagaaacccacggcagcggacgaggaa
gagaccacaaagaagcgcaagaagaagggcgaagaagagtcgggcgtggcctgcagctat
tcaaagcgtatcgccgacgcaccggttgctgagaaacccaccgtcgaaacccacggtccg
ctggtggaacaggctgtttaa
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