KEGG   Alloacidobacterium dinghuense: H7849_04515
Entry
H7849_04515       CDS       T08177                                 
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
adin  Alloacidobacterium dinghuense
Brite
KEGG Orthology (KO) [BR:adin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:adin03009]
    H7849_04515 (rlmD)
Enzymes [BR:adin01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     H7849_04515 (rlmD)
Ribosome biogenesis [BR:adin03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    H7849_04515 (rlmD)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Cons_hypoth95 TRM5-TYW2_MTfase RsmJ
Other DBs
NCBI-ProteinID: QNI33234
UniProt: A0A7G8BL14
LinkDB
Position
complement(1122804..1124072)
AA seq 422 aa
MRLEIEKCVYGGAGLARADGKAIFVPFTLPGEVVEAHITEDKGSYANAELDGVLDPSNER
AAAPCDYFGQCGGCQYQHAAYAQQVDLKVNILRETLERARIASIPEIISVSAEPLAYRNR
VRLHIQREPFALCYKKRASHSNLAVNRCPIAAPLLQRASAAATRIGSEFFQEFDEIEFFS
NGDESELLLSLRTRHLVRNLPSALKEVCEDLRQELPALAGASVFSTSDAKHPDKHVAEWA
AQALSYRVGDFAYSVSAGSFFQVNRFLVSQLVELVTAEFSGGLAWDLYAGVGLFAQALGR
NFGKIVAVEAAPSSWNDLRRNLSSDAHKTVRSGTLEFLHRPQGGTPDLVVIDPPRTGLGG
KVVSLLTKVRPQTIVYVSCDPSTLSRDLRALVESGYHLRTIHMVDLFPQTFHLESVTVLS
LG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaggcttgagattgaaaagtgcgtctatggcggtgcaggacttgcacgtgccgacggc
aaagcgatttttgtgccttttacgctgcccggcgaagttgttgaggcacacatcaccgaa
gacaaaggcagctatgccaatgcggagttggatggcgtgcttgatccatcgaacgaacgt
gcggctgccccttgtgattattttgggcaatgcggtgggtgccaatatcagcacgctgct
tacgcacagcaggtggacctaaaggtcaatattttgcgggaaacgctcgagagggcgcgg
atcgcttccattcctgagattatttcggtatccgcggagccgctcgcttaccgcaatcgc
gtgcgcctgcacatacaacgtgaacccttcgctctttgctataagaagcgtgcctcccac
tcgaatcttgcggtaaacagatgccctatcgcagctcccttgctgcaacgagctagtgcc
gccgcaacacgaatcggttcggagttttttcaagaattcgacgaaatcgaattcttctca
aacggcgatgagagcgagctgctcctgtcgcttaggacgcggcacttagtcaggaacttg
ccctcagcgctgaaagaagtttgcgaggatttgcgacaagagcttccagcgctcgctggg
gcaagcgtcttctcaaccagcgacgcaaaacacccggataaacatgtggccgagtgggca
gcacaggcgctctcgtatcgagtgggtgattttgcatattccgtgagcgccggatccttt
tttcaagtgaatcgatttctcgtttcgcagctggtcgagcttgtcactgcggagttttcc
ggcggacttgcatgggatttatatgcgggtgttgggttgtttgcgcaggcactcggccgg
aactttgggaagattgttgcagttgaagctgctccatcgtcatggaacgatctgcgtcgg
aatctttctagcgacgcgcacaaaacggttcggagtggcaccctggagttcttgcacaga
ccgcaaggaggaacgcccgaccttgtcgtcatagacccgccgcgcactggccttggaggc
aaagtcgtctccctgcttaccaaagtaaggccgcagaccatcgtttacgtctcgtgtgac
ccgtcaacgctctcgcgcgatctccgcgcgttggtagaatccggttatcacctcagaact
attcacatggtggatctctttccgcagacgttccatctcgaaagcgtcacggtgttgtcg
ctcggttga

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