Alloacidobacterium dinghuense: H7849_04970
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Entry
H7849_04970 CDS
T08177
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
adin
Alloacidobacterium dinghuense
Pathway
adin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7849_04970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adin03019
]
H7849_04970
Enzymes [BR:
adin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H7849_04970
Messenger RNA biogenesis [BR:
adin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H7849_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_C_2
Utp25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QNI33315
UniProt:
A0A7G8BL95
LinkDB
All DBs
Position
1237873..1239024
Genome browser
AA seq
383 aa
AA seq
DB search
MNQFSDFNLSPALKTRLAAANFVTPTPVQAGAIPPALEGKDVLATAQTGTGKTLSFLIPI
IERLPQSANKNSKALILLPTRELAMQVEQAFRKISAGSNLQVALVCGGMNEGPQLQSIRK
GARLIVATPGRLEDYLKRKLVRLDQVEMLVLDEVDRMLDMGFQPAIRRISDAIPAKRQTL
CYSATLDAQIKNVVRDYLKDPVRIEIGSVLKPSENVELQSFEVEQEKKLELLEHLLQSEK
GSFLVFVRTKHGADRVAKKLCRSGWGATQIHGDRSQSQRNAALRSFAEGKHRVLVATDVA
ARGIDVSHVAHVVNYDIPKVAEDFVHRVGRTGRASSHGVASTFAAPNERRDLRRIEKTLS
IQMKRFRVKGMAPSMGSRQAVQA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaattttcagatttcaatttgtcgcctgcgcttaagacgcgcctggcggctgct
aattttgttacgcctacgcctgtgcaggcgggggcgattcctccggctttggaggggaaa
gacgtactggcgacagcgcagacgggcacgggcaagacgctcagctttctgattccgatc
atcgagcggttgccgcagtccgcgaacaagaactcaaaggcgctgattctgctgcccacg
cgtgagcttgcgatgcaggtcgagcaggcgttccgcaagatctctgctggatcgaatctt
caggttgcgctggtttgtggcggcatgaacgaagggccgcaactgcagtcgattcgcaag
ggagcgcggctgattgtggcgactccgggtcgtctcgaagactaccttaagcgcaagctg
gtcaggctcgatcaggtagagatgctggtgctggatgaagtggaccgcatgctggatatg
ggctttcagcccgcgatccggcgcatttccgatgcgattccggcgaagcgtcagacgctg
tgctattcggcgacgctcgatgcgcagattaagaatgttgtgcgcgactacctgaaagat
ccggttcggatcgagatcggatcggtgctcaagccttcggagaatgtcgaactgcagagc
tttgaagtggagcaggaaaagaagctcgaactgctggagcacctgctgcagtcggagaag
ggcagcttcctcgtctttgtgcgcaccaagcatggcgcggatcgcgtggcgaagaagctc
tgccggtcgggttggggcgcgacgcagattcacggcgaccgttcgcaatcgcagcggaac
gcggctctgcgcagcttcgcagaaggcaagcatcgggtactggttgcgacggacgtggct
gctcgcggcattgacgtctcacatgtggctcacgttgtgaactacgacattcccaaggtg
gcggaagacttcgtccatcgcgtcgggcgtacggggcgggcttcgagtcatggcgtggct
tcgaccttcgccgctcccaacgaaagaagggacttgcgcaggatcgaaaagacgctttcg
attcaaatgaagcggtttcgggtgaaggggatggctccttcgatgggctcgaggcaggct
gttcaagcctag
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