Alloacidobacterium dinghuense: H7849_17630
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Entry
H7849_17630 CDS
T08177
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
adin
Alloacidobacterium dinghuense
Pathway
adin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7849_17630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adin03400
]
H7849_17630
Enzymes [BR:
adin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H7849_17630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H7849_17630
DNA repair and recombination proteins [BR:
adin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7849_17630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
DUF7573
Lar_restr_allev
Ribosomal_S13
Zn_Ribbon_TF
DZR
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QNI30922
UniProt:
A0A7G8BEF2
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All DBs
Position
4278881..4279780
Genome browser
AA seq
299 aa
AA seq
DB search
MPELPDIAAYISALESRIAGQPLEHVRINSAFLLRTARPPISDVEGHVVAELRRIGKRIA
MKFDNDLWLVFHLMIAGRLHWKAAGAKLAGRNSLAAFDFPNGSLVLTEAGTKRRASLHVF
ANEEELRSVDPGGIEIFSSNLDSFRIALTAENRTLKRALTDPRILSGIGNAYSDEILYAA
QLSPITLTHKLQPQEWELLFTATRNTLQLWIDRLSNEAKSGFPEKVTAFRKDMAVHGRYG
EPCPRCGQKIQRIRYADNETNYCANCQTGGKVLADRSLSRLLGSDWPRTLDELEALKRR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcccgacatagccgcctacatcagcgcactggaatctcgcatcgccgga
cagccgcttgagcatgtccgaatcaacagcgcctttctactgcgtacggcacggccgccc
atttccgatgttgaaggccatgtcgtggcagagttacgccgtatcggcaagcgcattgcc
atgaaattcgacaatgatttgtggctcgtgttccacctgatgattgccggccgactgcac
tggaaagcagcaggcgcgaaactggccgggcggaatagtctggcagcgtttgattttccc
aatggttccctggtgctgactgaagcgggcacaaagcgacgagcatccttgcacgtcttt
gcgaatgaagaggaattgcgttcggtcgatcctggaggtattgaaattttctcaagcaat
ctcgattcgttccgcatagcgctcaccgcggagaaccgcaccctcaaacgcgctcttact
gatccgcgtatcctcagcgggatcggcaacgcctattccgacgagattctgtatgcggcg
cagttgtcacccattactctcacgcacaagctgcaacctcaggaatgggagctgctgttc
acagctacccgcaatactttgcaactctggatagaccggctcagcaatgaggcgaagtct
ggatttccggaaaaggtcacagcatttcgcaaggacatggcagtgcacggacgctatgga
gaaccatgcccgcgatgcggccaaaaaattcagcgcattcgttatgccgataacgaaaca
aattattgcgcaaattgccagaccggcggaaaggtcctcgctgatcgtagcttgtcgcgt
ctgctgggatcggattggccgcgtacactggacgagttggaagcgctcaagcgacgctga
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