Alloacidobacterium dinghuense: H7849_18125
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Entry
H7849_18125 CDS
T08177
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
adin
Alloacidobacterium dinghuense
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adin03032
]
H7849_18125 (gyrB)
03400 DNA repair and recombination proteins [BR:
adin03400
]
H7849_18125 (gyrB)
Enzymes [BR:
adin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H7849_18125 (gyrB)
DNA replication proteins [BR:
adin03032
]
Prokaryotic type
DNA Topoisomerases
H7849_18125 (gyrB)
DNA repair and recombination proteins [BR:
adin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H7849_18125 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QNI31011
UniProt:
A0A7G8BEP1
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All DBs
Position
4386109..4388763
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AA seq
884 aa
AA seq
DB search
MSTKELSVSTVSPDELELASVKQNGQKKMNGQDGAYTSDNIKVLEGLEAVRLRPAMYIGS
TGEMGLHHLVYEVVDNSVDEALAGYAKKIEVVIHVDNSITVIDDGRGIPVDEKTLDNGEK
MPAVQVVLTKLHAGGKFDSSTYKVSGGLHGVGVSCVNALSEEFDVEIWRDNHTYEQDYER
GHPVSKLRQTGTSKKRGTKVHFLPDKTIFTVTEYNYDTLAQRLRELAFLNKGLEITLTDE
RTTDPKTGEAKRAEFRYAGGIAEFIKHINRGKQILHDKPIVMEAERDGVDMEIALQYNDG
YSDTVFTFANNINTVDGGSHLSGFKTALTRTINAIGQQMGLFKDVKENLSGDDVREGLVA
VISVKLPQPQFEGQTKGKLNSDIAGTVQALVNEKLGMFLEQNPPVARKIINKAIDAARAR
EAARKARDLTRRKGALDGGGLPGKLADCSERQPERCELYLVEGESAGGTAKQGRDRRFQA
ILPLKGKILNVEKARYDKMLGHEEIRAMITALGTGIGKEDFDPAKLRYGKIILMTDADVD
GSHIRTLLLTFFFRHMQELIKRNHVYIAQPPLYRIKKGKFEQYIKDDREFVKVMVKRASD
GMIVRHGENATKLEGPALTKFMGQLNEYLGFFDKVNKRLRNDEVTGLFAKLFAHEGKEPA
KRTDFEGDASTVPAKLTEFYNELKKIEKNYQFKGLDKPVHDEEHQTWSLIFHDAQGAERK
IDWTFASAPETRQMLAKYSQIKDLLEPPFLIEYASKAATAAEPDPEETEGETTGEIEAGK
PAPKRIGRASHEPVEKQTPHELFEYVIEQGRREYQVQRYKGLGEMTAAQLWETTMDPEHR
TLLTVKLEDIAETETIFTTLMGEDVEARRKFIEDNALDVKNLDI
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaagagctttccgtttcaacagtttcccccgacgaacttgaacttgcttcc
gtaaaacagaatggccagaagaagatgaacggtcaggacggcgcttatacaagcgacaat
atcaaggtgcttgagggccttgaggcggtgcgcctgcgtccggcaatgtatatcggctcg
acgggtgagatgggactgcaccacctggtctatgaggtggtcgataactcggttgatgaa
gccctggctgggtatgcgaagaagatcgaggtagtgattcacgttgataactcaataacg
gtcattgatgatggccgtggcattcctgtagatgaaaagactctcgacaacggcgagaag
atgcctgccgtgcaagttgttctaaccaagctgcacgcgggtggtaagttcgattcctcg
acctacaaagtatcgggtggtctgcatggtgtgggcgtatcgtgcgtcaacgcgctgagc
gaagagttcgatgtagagatctggcgcgacaatcacacatatgagcaggattacgagcgc
ggtcatccggtctcaaagctgcgacagacggggacatcaaagaagcgcgggaccaaagtt
cactttctgcccgacaagacgatttttaccgtcacggaatacaactacgacacgctggcg
cagcgtctgcgcgaactcgccttcttgaacaagggccttgagatcacgcttaccgacgag
cgcactaccgatccgaaaacgggagaggccaagcgcgcggagtttcgatatgccggcggc
attgccgagttcatcaagcacatcaaccggggcaagcagattctgcatgacaagccgatt
gtgatggaagccgagcgcgacggcgtcgacatggaaattgcgctccagtacaacgacggc
tactcagacacggtctttacctttgcgaacaacatcaacacggtcgacggcggctcgcat
ctctccggcttcaagacggcgctgacgcgcacgatcaatgcgatcggtcagcagatgggc
ctcttcaaggacgtaaaggaaaacctctccggcgacgacgtgcgcgagggactggttgcc
gtcatcagcgtgaagctgccgcagccgcaatttgaaggccagaccaagggtaagctcaat
tcagacattgccggaaccgtccaggcgctcgtcaacgaaaagcttggcatgtttctcgaa
cagaatccgccggtcgctcgcaagatcatcaacaaggcaatcgatgcggcccgcgcacgt
gaagctgcgcgaaaggcacgcgatctgacgcggcgcaagggcgcgctcgacggtggtgga
ctgccgggcaaactcgccgattgcagtgagcgccagccggaacgctgtgagctttatctg
gtcgagggcgaatcagcagggggaacagccaagcaggggcgcgaccgccgcttccaggcg
attctgccgctcaagggcaagattctcaacgttgagaaggcccgctacgacaaaatgctg
gggcacgaagaaatccgcgccatgatcacggcgctgggcactggcattggcaaggaagac
ttcgatccagcgaagctgcgttacggcaagatcattctgatgaccgacgcggacgtcgac
ggttcgcacattcgcacgctgctgctgaccttcttcttccgccacatgcaggagctgatc
aagcgcaatcacgtgtacatcgctcagccacctctctatcgcatcaagaagggcaagttt
gagcagtacatcaaggatgaccgcgagttcgtgaaggtgatggtcaagcgcgcgtccgat
ggcatgattgttcgtcatggcgagaatgctacgaagcttgagggccctgcgctcaccaag
ttcatggggcagctgaacgagtatctcggcttcttcgacaaggtgaacaagcgcctgcgc
aatgacgaagttaccggcttgttcgcgaagctttttgcgcatgaaggcaaggagccagcg
aagcgcactgacttcgagggcgacgcatcaaccgtcccagccaaactcacggagttctac
aacgaactcaagaagatcgagaaaaactatcagttcaagggtctggataagccggtgcac
gacgaagagcatcagacctggtcgctcattttccacgacgcgcaaggcgcggaacggaag
attgactggacctttgcatcggcgcccgagacgcggcagatgcttgcgaaatattcacaa
atcaaggacctgcttgaaccgccgttcctgatcgaatatgcgtcgaaggccgcgactgcc
gctgagccggatcccgaagaaaccgaaggcgagaccacgggcgagatcgaagccggcaag
ccggcgccaaagcgcattggccgcgcctcgcatgaaccggtcgaaaagcagacgccacac
gagctattcgaatacgtcatcgaacagggtcggcgcgaataccaggtgcagcgttacaaa
ggtcttggcgaaatgacagcagcgcagctgtgggagacaaccatggatcccgagcaccgc
acgctgcttaccgtcaagcttgaggacattgccgagacggaaacgattttcactacgttg
atgggtgaagacgttgaggctcgccgcaagttcatcgaagacaatgcgctggatgtaaag
aacctggatatttga
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