Alloacidobacterium dinghuense: H7849_18310
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Entry
H7849_18310 CDS
T08177
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
adin
Alloacidobacterium dinghuense
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adin03019
]
H7849_18310 (hrpB)
Enzymes [BR:
adin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
H7849_18310 (hrpB)
Messenger RNA biogenesis [BR:
adin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H7849_18310 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
UvrD-helicase
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QNI31043
UniProt:
A0A7G8BES3
LinkDB
All DBs
Position
complement(4435091..4437427)
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AA seq
778 aa
AA seq
DB search
MSRKLVLPVDEILPTILSSLKRSPNLVIEASPGAGKTTRIPPEMLKLVDGEVMVLEPRRI
AARMAARRVASEMGERIGETIGYQVRFDEVAGPRTRLRFVTEGVLTRRLISDPNLKGVAA
VVLDEFHERHLESDLALALLKLLQGRRPDLRIVVMSATLEAASVAHYLDDCPIIRSKGNL
FELSIEHLPYSPKPLEMQVRDAVEKLIARENSGDILAFLPGAAEIYRAMRECEESARRAG
LVILPLHGSLSPEEQDRAVTPGSQWKLILATNVAESSITVEGVRAVIDSGLARMATWSRW
TGLQTLQVGRVSKASATQRAGRAGRTGPGRVLRLYTKEDYQLRAEHDTPEILRSDLSQLC
LTMRAMQIDPVKDVRWLDAPPDGAMESAGSLLDRLGATGDMVRQLARLPVSPRLSRLVID
AQKRGVGEDGCVVAALLSAGIEPGSNDLLSAMDQGRDQGRDPRLEQPLEQLRRIARPSRR
QHHDEDALLKSVLTGFPDRVARLRTGNQLLLSSGASAEVKGQPPRYEFMVAVDAEDRSDK
PLPLVRMTARIEPEWLIDLFPDRVREQSGVVWNRSAERVDAVSMLLYDDLVIQESRGAAP
APEVAAELLAQKAIEAGMGRFVDQDKLDLFLSRVEFAGLEPPDVLQTLRELCVGLLSFAE
LRTASQTFIQMLERKVGVRQLNQIAPESLRLQSGRQAKIHYERGKAPWIASRLQDFFGMR
ETLRIGQAHTPVVVHLLAPNHRPVQTTTDLAGFWERLYPQVRRELMRRYPKQSWPERP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgcaagcttgttcttccggtcgatgaaattctgccgacaatcctctcttcccta
aagcgctctccgaacctcgtgatcgaggcgtcacccggtgctggtaagacgacgcgcatt
cctcccgagatgctcaaactcgtggacggtgaggtcatggtgctcgaacctcgtcgcatt
gcggcacggatggcggcgcggagagttgcctcggaaatgggtgaacggatcggcgaaacg
attggctaccaggttcgatttgacgaagtcgcgggcccgcgcactcggctgcggtttgtg
actgaaggggtgttgacgcggcgcctcatttcagacccgaatctcaaaggtgtcgcggcc
gtagtactagatgagtttcacgaacgccatctcgaaagcgatctcgctctcgccttattg
aagctgctgcaaggcaggcggcctgatctgcgcatcgtggtcatgtcagcaacgctcgag
gccgcatcggtcgctcattatcttgatgactgcccgatcatacgatccaagggaaatttg
tttgagctttcgatcgagcacttgccctattccccaaagcctcttgaaatgcaggtgcgg
gatgcagtggaaaagctgatcgcgcgtgaaaactccggggatattttggcatttctcccc
ggcgctgctgagatttaccgggcaatgcgcgagtgtgaagagagtgcgcgacgagcgggc
ctggtgattctgccgttgcatggcagtttgtctccagaggaacaagaccgtgcggtcacg
ccaggatcgcagtggaaacttatattggcgaccaatgtcgcggaaagctcgattacggtt
gaaggagtacgcgctgtcattgacagcggtctggctcgaatggcgacctggtcgcgatgg
accggattgcagacactgcaggtcggacgagtgagcaaggcttctgcaacgcagagagcg
ggacgagccgggcgcaccggacccgggcgcgtgttgcgcctttacactaaagaggattac
caattacgggcggagcacgatacgccggaaattttgcgcagcgatctgtcgcagctctgc
ctgacgatgcgcgcgatgcagattgatccggtaaaagatgtgcgatggctggatgcgccg
cccgacggcgcgatggaaagcgccggttcacttctggatcgccttggagccactggagat
atggtgcggcagttggcgcgccttccggtgtctccgcggttgtcgcggcttgtgatcgat
gcgcagaaacgaggtgtgggggaggacggctgcgtggttgcagcgctgctctcggcaggc
atcgagccggggagcaacgatcttctctctgccatggatcagggtcgggatcagggtcgg
gatcctcgactggagcagcctcttgaacaactacgcagaattgcgcgaccgtctcgacgc
caacatcatgatgaggatgctctactcaagtctgtgctgacaggctttccagaccgtgtg
gcgcgactgcgaacggggaatcagttactgctctcgtcaggggcatcggctgaggtgaag
ggccagcctcctcgctatgagtttatggtggctgttgatgccgaagaccgcagtgataag
cctctgccattggtccgcatgacagcacgcatcgagccggagtggttgatcgatttgttt
ccggatcgcgtgcgagagcaatccggcgtcgtatggaatcggtcggcggagcgggtggat
gccgtaagcatgctgctctatgacgatttagtgattcaggaatcgcgcggcgccgcgcct
gcgcccgaagtggctgccgaattgctggcacagaaggcgatcgaagcggggatgggacgc
tttgtcgatcaagacaagcttgatctcttcttgtcgcgggttgagtttgccggtcttgag
ccgccggatgtactgcaaacgcttcgggagttgtgcgttggattgctgagctttgcggaa
ctgagaaccgcatcacaaaccttcatccaaatgctggagcggaaggtcggtgtccgtcaa
ctcaatcagatcgcgcccgaatcgctgcgattgcagagtggacggcaagcgaagattcac
tacgaacgcggcaaggcaccctggattgcttcgcgattgcaggacttcttcggcatgcga
gaaactctgcgaatcgggcaagcccatacaccggtggtcgttcacctgcttgcgccgaat
catcgaccggtgcagaccaccacggatctggccggattttgggaaaggctctatccccag
gttcgccgcgagctgatgcggcgatatccaaagcaatcatggcctgagcgaccctag
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