Alloacidobacterium dinghuense: H7849_22630
Help
Entry
H7849_22630 CDS
T08177
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
adin
Alloacidobacterium dinghuense
Pathway
adin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H7849_22630 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adin03021
]
H7849_22630 (rpoC)
03400 DNA repair and recombination proteins [BR:
adin03400
]
H7849_22630 (rpoC)
Enzymes [BR:
adin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H7849_22630 (rpoC)
Transcription machinery [BR:
adin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H7849_22630 (rpoC)
DNA repair and recombination proteins [BR:
adin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H7849_22630 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QNI31800
UniProt:
A0A7G8BGY0
LinkDB
All DBs
Position
5405001..5409191
Genome browser
AA seq
1396 aa
AA seq
DB search
MYRSSPFELTSPITDFDAIRISLASPEKIRSWSHGEVTKPETINYRTFKPERDGLFCARI
FGPVTDWECLCGKYKRMKHRGVICDKCGVEVTLSKVRRERLGHIELASPCSHVWFFKGLP
SRIGHLLDISLRDLESVLYFESYVVVDPGDSPTREREIIKDENRFRELDQQYRPSGFKGM
MGAEAIKELLKRVNVDELAVELRERMKAETSLQKRLKYSKRLKVVEAFRKSGNKPQWMIL
DVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKKLMDLHAPEVIVRNEKRML
QEAVDALFDNGRRGRVLRGANNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYHRLEQTGHCTTIKQAKEMVELQEPIVWDILEEVIKDH
PVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCTAFNADFDGDQMAVHIPLSPEAQVE
ASVLMLASHNILSPASGQPITVPTQDMVLGLYYLTKAKKGGKGEGRVFANTEEVLMALEA
KEIETLTPIRLRYTGSVLDMTTAYDDQDLTHTEPVEYDKQYITTTVGRAILNDALADGMP
YVNGLLKKKGIGQLVNYCYLNLGLEVTVKMLDRIKELGFQYATRSGLSVGLDDMVIPETK
YGVVREAEKQRFAVQQQYLDGAITNGERNNKVIQLWSSVTEKVADEMFNNMKNADKEGAM
NPIYIMADSGARGSKQQIRQLSGMRGLMAKPSGEIIETPITANFREGLTVLEYFISTHGA
RKGLADTALKTADSGYLTRRLVDVAQDVIVSEHTCGTVEGIYVTPIVESGEIIEPLRDRI
IGRVSLEKIKDYEGSVIVDINQEITEDLASQIQAAGIERVKIRSVLTCESKRGVCILCYG
RNLGSGKMVELGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASRVSEQSKLDAKNNGTVRF
INMVTVRSKGGDLVSMNRSGSIAVVDDRGREKERYQVVYGAKLKVEDGQKVELGQAMVEW
DPYTFAILTEIGGTIQFKDLQEGITLHEEVDEVTGLSRLVVGDAPDEKRQPAILIKGSKG
NKRYLMPSRAHLMIQDGDEVFPGDILAKIPRETTRTKDITGGLPRVVELFEARKPRETAI
ISEIDGVVKFGEVSKGQRKIYVTADNGEEKEYSVPRGVHVNVQEGERLRAGEPLMDGPLN
PHDILAVLGEKELQAYLVNEIQEVYRLQGVAISDKHIETIVRQMLRWVKIEEVGDTNFLL
EQQVDKFRFRNENERAISNGGRPATGRPLLLGITKASLSTESFISAASFQETTRVLTEAS
INGAVDNLRGLKENVIVGRLIPAGTGMEYYRNISLSPELEEAAAKVQQEVQTAYEEAERE
LEMMRQEGEAEEMAAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
ttgtaccgttccagcccgtttgaattaaccagcccgatcacggatttcgacgctatccgc
atctcgctcgcttcgcccgagaagattcgcagctggtcgcatggcgaagtcaccaagccg
gaaaccatcaactaccgcaccttcaagccggagcgcgacggactgttctgcgcccgcatc
ttcggcccggtcaccgactgggagtgtctctgcggcaagtacaagcgcatgaagcatcgc
ggcgtcatctgcgacaagtgcggcgttgaagttacgctgtcaaaggttcgccgtgagcgc
ctcggccacatcgagctggcctcgccctgctcgcacgtctggttcttcaagggcctgccg
tcgcgcatcggccacctgctcgacatttctctgcgtgatctcgaaagcgtgctctacttc
gaaagctatgttgtcgtagatccaggcgactcgccgacgcgcgagcgcgagatcattaag
gatgaaaaccgcttccgcgaactcgaccagcagtatcgcccgtctggtttcaagggcatg
atgggtgccgaggcgatcaaggaattgctgaagcgcgtcaatgttgacgagctggccgtc
gagctgcgcgagcgcatgaaggctgagacctcgctgcagaagcgcctcaagtattcgaag
cgcctcaaggttgtcgaagccttccgcaagtccggcaacaagccgcagtggatgattctc
gacgtaatcccggtcattccgccggagctgcgtcccctcgttcctctggacggcggccgc
ttcgcgacgtctgatctgaacgacctgtatcgccgcgtcatcaaccgcaacaaccgcctc
aagaagctcatggacctccacgcgcctgaggtgatcgtgcgcaacgaaaagcgcatgttg
caggaagctgtcgatgcgctcttcgacaacggccgtcgtggccgcgttctgcgcggcgcg
aacaaccgtccgctgaagtcgctctctgacaccctcaagggcaagcagggccgcttccgt
cagaacctgctcggtaagcgcgttgattactctggccgttcggtcatcgtcgtcggtcct
gagctgaaactgcatcagtgcggtctgccaaagaagatggcgcttgaactcttcaagccc
ttcatctatcaccgccttgagcagacaggccactgcacgaccatcaagcaggcaaaggaa
atggtcgagctgcaggagccgatcgtgtgggacatccttgaagaagtcatcaaggaccat
ccggtactcttgaaccgtgccccaaccctgcaccgcctcggcatccaggcctttgagcct
gtgcttgttgaaggcaaggccattaagattcacccgctcgtttgcaccgcgttcaacgcg
gacttcgacggtgaccagatggccgtgcacattccgctgtcgccagaagcgcaggtggaa
gccagcgtgctgatgctcgcttcgcacaacatcctgtcgcccgcgtccggtcagccgatc
accgttcctacacaggacatggttctcggtctctactatctgaccaaggccaagaagggg
ggcaagggtgaaggccgcgtcttcgcgaacaccgaagaagtactcatggccctcgaagcc
aaggagatcgaaaccctcacgccgattcgtctgcgctacaccggttctgtcctcgacatg
accaccgcatacgacgatcaggatctgacgcacaccgagccggtcgagtacgacaagcag
tacatcaccacgaccgtcggccgcgccatcctgaacgacgctcttgcggatggcatgccg
tacgtcaacggtctgctcaagaagaagggcatcggccagctggtcaactactgctacctg
aacctcggccttgaagttacagtcaagatgctcgaccgcatcaaggaactgggcttccag
tacgcgacgcgctccggcctctccgtcggcctggacgacatggtcatcccggagacgaag
tacggtgtcgtgcgcgaagcggaaaagcagcgctttgccgtgcagcagcagtaccttgac
ggcgcgatcaccaacggtgagcgcaacaacaaggtcattcagctgtggtcatctgtaacc
gagaaggttgcggatgagatgttcaacaacatgaagaacgccgacaaggaaggagccatg
aacccgatctacatcatggccgattccggtgctcgtggttcgaagcagcagattcgtcag
ctctccggcatgcgcggactgatggcgaagccgtcgggcgaaatcatcgagacccccatc
acggcaaacttccgtgaaggcctcaccgtgctcgaatacttcatttcgacgcacggcgcg
cgtaagggtctggctgacaccgctctgaagactgctgactccggctacctgacacgtcga
ttggttgatgtggcgcaggatgtcatcgtcagcgagcacacctgcggaaccgtcgaaggc
atctacgtaactcctatcgtcgagtctggcgaaatcatcgagccgctgcgtgaccgcatc
atcggccgcgtctcgctcgaaaagatcaaggactacgaaggcagcgtcatcgtcgacatc
aaccaggagatcaccgaagacctcgcatcgcagattcaggcagccggcattgagcgcgtc
aagattcgctccgtgctcacctgcgaatccaagcgtggcgtctgcatcctctgctatggc
cgcaacctcggctccggcaagatggttgagctcggcgaagctgtcggcgtcatcgccgcg
cagtccatcggtgagcccggaacgcagctcacgatgcgtaccttccacatcggtggtacg
gcatcgcgtgtttcggagcagtcgaagctcgacgcgaagaacaacggtaccgtccgcttc
atcaacatggtcaccgttcgttcaaagggtggcgatctggtttccatgaaccgttcgggt
tcgatcgccgttgttgacgaccgtggccgtgagaaggagcgctaccaggttgtgtacggc
gcaaagctgaaggtggaagacggtcagaaggtcgagctcggtcaggcaatggtcgagtgg
gatccctacacgttcgcgatcctcactgagatcggcggcaccatccagttcaaggacctg
caggaaggcatcaccctgcatgaggaagtcgatgaggttaccggcctctcgcgcctcgtc
gtcggcgatgcacctgatgagaagcgccagccagcgatcctcatcaagggcagcaagggc
aacaagcgttatctgatgccttcgcgcgctcacctaatgatccaggacggcgacgaagtc
ttccccggcgatatccttgccaagattccgcgcgaaaccacgcgcaccaaggacatcacc
ggcggtctgcctcgcgtcgtagaactcttcgaagcccgcaagccgcgcgaaaccgccatc
atcagcgaaatcgatggtgtggtgaagttcggcgaagtcagcaagggtcagcgtaagatc
tacgtcaccgctgacaacggcgaggagaaggagtactcggtgcctcgcggcgtccacgtc
aacgtgcaggagggtgaacgcctgcgcgccggcgagccgctgatggatggaccgctcaac
ccgcacgacattctcgccgtgctcggtgagaaggagctgcaggcctacctggtgaacgaa
atccaggaagtctaccgtctccagggcgtggccatctccgacaagcacatcgagaccatc
gtccgccagatgctgcgctgggtgaagatcgaggaagtcggcgacacaaacttcctgctc
gaacagcaggttgacaagttccgcttccgcaacgagaacgagcgcgccatctcgaatggt
ggacgtccggcaactggccgtccgcttctgctcggtatcaccaaagcgtcgctgtctacc
gagagcttcatctcggcagccagcttccaggagaccacgcgcgtactgaccgaggcgtcc
atcaacggtgccgtcgacaacctgcgcggcctcaaggagaacgtcatcgtcggccgtctc
atcccggctggaaccggcatggaatactaccgcaacatctcgctctcaccggaactggaa
gaagcggcagccaaggtccaacaggaagtgcagactgcttacgaggaagcagagcgcgaa
ctcgaaatgatgcgccaggaaggcgaagccgaagaaatggctgccgaataa
DBGET
integrated database retrieval system
