Alloacidobacterium dinghuense: H7849_24500
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Entry
H7849_24500 CDS
T08177
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
adin
Alloacidobacterium dinghuense
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adin03019
]
H7849_24500
Messenger RNA biogenesis [BR:
adin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H7849_24500
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
Cas3_HD
DUF6994
Motif
Other DBs
NCBI-ProteinID:
QNI32118
UniProt:
A0A7G8BHU8
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All DBs
Position
5830483..5831532
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AA seq
349 aa
AA seq
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MKDLFVGDLGKFENQVVTGFFAVAAKQVRSKKDGAVYFAMTLCDSTGQIECRMWEVADAQ
PFESGDVVKARGQISRYQDRLQLTLDKIRRANPEEYDLGDFVPKTSRDIEELWAELNGYV
STLTNAHLQALLRAFIDDPEIASALKSAPAAKSMHHAWVGGLLEHVVSLLGISDLAARHY
PEINRDLLLTGVVLHDIGKLHELRWGTSFDYTLEGQLIGHISIGISMVEKKLANLQDFPD
NLRVLVEHIILSHHGKYEFGSPKLPMIPEALLLHYLDDLDAKMQTMRSEFARAGALGRAP
GQMTEWVRALERPLLNTAGYLGELAPTTEATAAEELEPREEINALPAED
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgtttgttggagatttagggaaatttgaaaatcaagtggtgacgggcttc
tttgccgtcgccgcaaagcaggtgcgcagcaagaaagacggcgccgtctactttgccatg
actctctgcgactctaccggccagattgaatgccgaatgtgggaagtcgcggatgcccag
ccttttgagtccggcgatgtcgtgaaggcccgaggacagatttcgcgttatcaggaccgc
ctgcagttgacactggataagattcgtcgggcaaaccctgaagagtacgacctcggggat
tttgttcccaagacctcacgcgatattgaggagctgtgggcggagctgaatggctatgtc
tccacccttaccaatgctcacctgcaggctctactacgcgcctttatcgacgatccagag
attgcttctgcgctcaagagcgcacccgctgccaagagtatgcaccacgcctgggtgggc
ggcctgttggaacatgtcgtttcattacttggcatcagcgatctggcggcgcggcactat
ccggaaatcaatcgtgacctgcttctcactggcgtggtgctccacgatatcggcaagctg
catgaattgcgttggggaacgagcttcgattacacgctcgagggtcaactcatcggccac
atttcgattggaatctccatggtggagaaaaagctggccaatctgcaggatttcccggac
aatcttcgcgtgttggtcgagcacattattttgagtcaccacggaaagtatgagttcggc
tcacctaagctgcccatgattccggaagcactattgctccattacctcgatgatcttgat
gccaagatgcagacgatgcgcagcgaatttgcgcgtgctggcgcgctaggccgtgctccc
ggtcagatgacggagtgggtccgagcgctggagcggccgcttctgaatacggccggatat
ttgggtgagctggcgccgaccacagaagctacggcagccgaagaacttgagccacgggag
gaaatcaatgccttacctgctgaagactga
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