Alloacidobacterium dinghuense: H7849_25605
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Entry
H7849_25605 CDS
T08177
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
adin
Alloacidobacterium dinghuense
Brite
KEGG Orthology (KO) [BR:
adin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adin03016
]
H7849_25605
Enzymes [BR:
adin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H7849_25605
Transfer RNA biogenesis [BR:
adin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H7849_25605
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
TetR_C_16
Motif
Other DBs
NCBI-ProteinID:
QNI32316
UniProt:
A0A7G8BIE6
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All DBs
Position
complement(6082366..6083829)
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AA seq
487 aa
AA seq
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MNDNHQVNLQALARQSMLEHGFHPDFSAAVRKELQSLESHAPDHHPQAARDLRQLLWSSI
DNDTSRDLDQIEFAQEAEDGPVRIQIAIADVDAFVPAGSAIDKHASDQTTTVYTGVHNFS
MLPDELSTGLTSLLEDQERLGVVYEFSVDGEGCVGEHNIYRASVRNHAQLAYPSVGAWLN
SGSNAPPKVASSSELQKQLLLQNRVAQVLRKERYRRGALNLQTIETHPLMTDGKPVDIET
QQKTPANDLIEDFMIAANEVVARSLERAGFSSIRRVVKTPKRWDRIVEVAAQFGTKLPGE
PDSKALQDFLCDRRAVDPDHFPDLSLTVVKLLGSGEYVLERVGETAPGHFGLAVQDYTHS
TAPNRRYADLVTQRLIKAMLAKRRSPYSDDELAAIAQQCTKQEDAARKVEREMGKRIAAV
VMRSRIGQSFTAIVTGVNEHGSFVRTTHPHVEGMLVRGQKGVDVGDKLNVTLVHTDPERG
YIDFARS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataaccatcaggtcaacttgcaggctttggcgcgccagtccatgctggagcac
ggttttcatccagatttttccgctgcggttcgaaaggagcttcagtcactggagtcacac
gcgccagatcaccatccgcaagctgcgcgggatctccgtcagttgctgtggtcatcgatt
gataacgatacttcgcgagatctcgatcagattgagttcgcgcaagaggcggaagatggg
cctgttcgcatccagattgcgattgcggatgtggatgcatttgtaccggcaggttcggcc
atcgataagcatgcctctgaccagacaacgactgtctacaccggcgtgcataacttttcc
atgctgccggatgagctttcgaccggtctcacttcccttcttgaagaccaggagcgattg
ggggttgtgtacgaattttccgtggatggcgaaggctgcgttggcgaacacaatatctat
cgggcttccgtaagaaatcatgcgcagcttgcttatccatcggttggagcctggctgaat
tccggcagcaacgccccgccgaaagtggcgagttcaagtgaactgcagaaacagctcttg
ctgcagaatcgcgttgcccaggtgctacggaaggaacgctatcgccgcggagcgctcaat
cttcaaacgatagaaacccatccgttgatgacggacggaaagcctgtcgatattgagaca
caacagaagacgccggccaacgatctgattgaagacttcatgattgcggccaatgaagtg
gtcgcccggagccttgagcgggcagggttctcttcgattcgacgcgtggtgaagacgccg
aagcgctgggaccgcattgtggaggtggctgcgcaattcggtacgaagctcccgggcgag
cctgactccaaggctctgcaggatttcctttgcgaccgccgtgccgttgatccagatcac
tttccggatttgtcgctgacggtggtgaagctgctcggctcgggtgaatatgtgctggag
cgggttggcgaaactgcgccgggacacttcggactcgctgttcaggattacacgcattca
acggcaccgaaccgtcgctatgcggatctggtaacgcaacgcctgatcaaggcgatgctc
gcgaagcggcgctcaccctattccgatgacgagcttgctgcgatcgcgcagcaatgtaca
aaacaggaagatgccgcgcgcaaagtggagcgtgagatgggaaagcgcattgctgcggtt
gtgatgcgaagccgcatcgggcaatcatttacagcaatcgttacaggtgtcaacgagcac
ggctctttcgtgagaactacccatccgcacgtagaaggcatgctggttcgggggcagaag
ggcgtggatgtcggtgacaagctgaatgtaacacttgtacataccgatcccgaacgggga
tacatcgacttcgctcggagctag
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