Azospirillum doebereinerae: ACIU1J_04480
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Entry
ACIU1J_04480 CDS
T10877
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
adj Azospirillum doebereinerae
Pathway
adj02024
Quorum sensing
adj03060
Protein export
adj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACIU1J_04480 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACIU1J_04480 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACIU1J_04480 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
adj02044
]
ACIU1J_04480 (secD)
Secretion system [BR:
adj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACIU1J_04480 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
SecD-TM1
Secretin_N
ACR_tran
PIG-F
Motif
Other DBs
NCBI-ProteinID:
XKH35539
LinkDB
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Position
contig_1:907356..908954
Genome browser
AA seq
532 aa
AA seq
DB search
MLYFSRWKIYTIVAICVAGFIVMLPNFLGRETLASLPSWYAHSKVSLGLDLRGGSHLLLE
VDMSAVIRDRVEGLVDGARQQLRTANVGYTAINAGDRAVTVQLRDPAQSEDAVKALRGLA
SPVGGGALGGGQPDVTVAASGNTVTVTLSEVALRDRATQAIEQSIEIVRRRIDETGVNEP
TIARQGTDRILVQLPGVEDPDRVKRLLGTTAKMTFRLVDTNADASTGRAPPGSEILPSAE
GERFQTNYVIRKKVEVDGATLKNASASTNSQSGEWVVNFEFNSAGANRFAEITRANVGRP
FAIVLDNKVISAPVIREPITGGRGQISGNFSAATANDLSVLLRAGALPAPLKVIEERTVG
PDLGADSIRAGLTAVAVGFVMVCVYMIASYGLFGSFACFALLINLVLTLAALSLLQATLT
LPGIAGVLLSLGLAVDANILINERIREETKKGRGVFASMEAGFSRAYSTIVDSNLTTAIK
MALLFIFGTGAIKGFAVTITFGILISMFTATVLVRLMMVTWLRRTRPAALPV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgctctatttttcgcgttggaagatttacacgatcgtggcgatctgcgtcgccggcttc
atcgtgatgctgccgaacttcctcggccgcgagacgttggcgagcctgcccagctggtac
gcccacagcaaggtctcgctgggtctcgacctgcgcggcggatcgcatctgttgctcgaa
gtcgacatgagcgcggtgatccgcgaccgcgtcgaggggctggtggacggcgcgcgccaa
cagctgcgcacggccaacgtcggctacaccgcgatcaacgccggtgaccgcgcggtgacc
gtccagctccgcgacccggcccagtcggaggacgcggtgaaggcgctgcgcggcctcgcc
agcccggtgggcggcggcgcgctgggcggcggccagccggacgtgacggtggccgccagc
ggcaacaccgtgacggtgacgctgagcgaggtggccttgcgcgaccgcgcgacccaggcc
atcgagcagtccatcgagatcgtccgtcgccgcatcgacgagaccggcgtgaacgagccg
accatcgcccgccagggcaccgaccgcatcctggtccagcttcccggcgtcgaggatccc
gaccgcgtcaagcggctgctcggcaccacggccaagatgaccttccgtctggtcgacacc
aacgccgacgcctcgaccggccgcgcccctccgggctcggagatcctgccgtccgccgag
ggcgagcggttccagaccaattacgtcatccgcaagaaggtcgaggtcgacggcgccacg
ctgaagaacgcctcggcctccaccaactcgcagagcggcgagtgggtggtgaacttcgag
ttcaacagcgccggcgccaaccgcttcgccgagatcacccgcgcgaacgtcgggcgtccc
ttcgccatcgtgctcgacaacaaggtcatcagcgcgccggtcatccgcgagccgatcacc
ggcgggcgcggccagatcagcggcaacttctccgccgcgacggccaacgacctgtccgtg
ctgctgcgcgcgggcgccctgccggccccgctgaaggtgatcgaggagcgcacggtcggc
cccgacctcggcgccgattcgatccgcgccgggctgacggcggtggcggtcggcttcgtc
atggtctgcgtctacatgatcgcgtcctacgggctgttcggctccttcgcctgcttcgcc
ctgctgatcaacctggtgctgacgctggcggcgctgtcgctgctccaggccaccctgacg
ctgcccggcatcgccggcgtgctgctgtcgctggggctggcggtcgacgccaacatcctg
atcaacgagcgcatccgggaagagacgaagaagggccggggcgtcttcgcctcgatggag
gccgggttcagccgcgcctacagcaccatcgtcgattcgaacctgacgacggcgatcaag
atggcgctgctgttcatcttcggcaccggcgccatcaagggcttcgccgtcaccatcacc
ttcggcatcctgatttccatgttcaccgcgacggtgctggtgcgcctgatgatggtgacg
tggttgcgccgcacgcggcccgccgcgctgccggtttga
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