KEGG   Azospirillum doebereinerae: ACIU1J_06330
Entry
ACIU1J_06330      CDS       T10877                                 
Name
(GenBank) CRISPR-associated endonuclease Cas3''
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
adj  Azospirillum doebereinerae
Brite
KEGG Orthology (KO) [BR:adj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:adj02048]
    ACIU1J_06330
Enzymes [BR:adj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACIU1J_06330
Prokaryotic defense system [BR:adj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    ACIU1J_06330
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII AAA_22 HD PhoH Helicase_C Cas3_HD
Other DBs
NCBI-ProteinID: XKH35873
LinkDB
Position
contig_1:1295847..1298168
AA seq 773 aa
MTQGVYAHSVPGRDESVWEPLSEHLTAVASHAAVSATVFGGQRMAEAMGALHDVGKLIQE
FQDYIRGKGTSVDHSTAGAVIARERYGAVLGQIMAFGIAGHHAGLANGRVAGGGISSLKE
RLDGKIPLPLSPDLDVAPATVTLSAPVLSTGFTHHFSLPFLIRMLFSCLVDADRLETERF
YARFDAEARGKTAARGCPLTVEDLRDRLDAHLLRFKDKDGPVNALRAEVLAGVRAKAEEA
PGLFSLTVPTGGGKTLASLAFALDHAVRHGLRRVIYVIPFTSIVEQTADVFREALGSDDA
VLEHHSGFDFDPPSRKTRRKTAESDDEAPDGARKLRLASENWDRPVVVTTSVQFFESLFA
SHPSSCRKLHAIAGSVVILDEAQTLPLKCLRPCLETLRELARGYRTSVVLCTATQPAVTV
EAGFAGGLDTVRELAPDPRDLYRRLKRVTVAHLPEPLDDETLAERLLDETQVLCIVNNRR
HARDLLRRIRGEDGARHLSTCLCAAHRRAELASIREELELKRPVRLVSTSLVEAGVDFSF
PTVYRAMAGLDSIAQAAGRCNRNGDLPELGRVFVFSSPEGEGRKPPPELGQFAEVAASVL
RGHDDPLALDTLRAYFQRLYWQRGPEELDAALVGDGPAPIRGILKALDLYKSDREYPFAD
IAKAFRIIESPLVPVIVPYKPAGDPDVVQRLLETLKRLPAEKTGGIARALQPYLVQIPRS
ARNALLAAGSAECVRGDEFGDQFVSLVNGDLYHPDVGLDWEDPTFRKIETGIF
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgacgcagggcgtttacgcgcattccgttccaggccgggatgaaagcgtctgggaaccc
ctgtccgagcatttgacggcggtggcctcgcacgcggcggtgtcggcgaccgtgttcggc
ggccagcgcatggcggaagccatgggggcgctgcacgatgtcggaaagctcatccaggag
tttcaggactacattcgcgggaagggaaccagcgtcgatcattccaccgccggggcggtg
atcgcgcgggagcggtacggcgcggtgctcggccagatcatggcgttcggcatcgccggg
caccacgccggtctggcgaacggccgggtggccggcggcggcatctcctcgctgaaagaa
cggctggacggcaagatccccctgcccctctcccccgatctggacgtggcgcccgcgacc
gtgacgctgtcggcgccggtcctgtcgacgggcttcacccatcacttctccctgcccttc
ctgatccggatgctgttctcctgcctggtcgacgccgaccggctggaaaccgagcgtttc
tacgcccgcttcgacgccgaggcgcggggaaagaccgccgcgcgcggctgtccgttgacg
gtggaagacctgcgcgaccggctggacgcccatctgctccggttcaaggacaaggacggg
ccggtcaacgccctgcgggccgaggtgctggctggggtgcgcgccaaggccgaggaggca
cccggcctgttctccctcaccgtgccgaccggcggcggcaagacgctggcctcgctggcc
ttcgcgctggaccacgcggtgaggcacggcctgcgccgggtcatctacgtgatccccttc
acctccatcgtcgagcagaccgccgacgtcttccgcgaggcgctcggcagcgacgacgcc
gtgctggagcaccacagcggcttcgatttcgacccgccgtccaggaagacccgcaggaag
acggcggagtcggacgacgaggcgccggacggcgcgcgcaagctgcggctggcgtccgag
aactgggaccggccggtggtcgtcaccacctcggtgcagttcttcgagagcctgttcgcc
agccacccctcctcctgccgcaagctgcacgccatcgccggatcggtggtgatcctggac
gaggcgcagaccctgccgctgaagtgtttgcgcccctgcctggagacgctgcgggagctg
gcgcgcggctaccggacctcggtggttctctgcacggcgacccagccggcggtgaccgtg
gaggccggcttcgcgggcgggctggacacggtgcgggaactcgcccccgacccacgggat
ctgtaccggcgcctgaagcgggtgacggtcgcgcatctccccgaaccgctcgacgacgag
acgctggcggaacggctgctggacgaaacccaggtcctgtgcatcgtcaacaaccggcgg
cacgcgcgcgacctgttgcgcaggatcaggggcgaggacggcgcgcggcacctgtccacc
tgcctgtgcgcggcgcaccgccgggcggagttggcgtcgatccgggaggaattggaactc
aagcggccggtccggctggtcagcacctcgctggtggaggccggggtggatttctcgttc
cccaccgtctaccgggcgatggccggtctcgactccatcgcccaggcggcgggccgctgc
aaccggaacggcgatctgccggaactgggccgcgtcttcgtgttcagcagccccgagggc
gagggccgcaagccgccaccggaactcgggcagttcgccgaggtcgcggccagcgtgctg
cgcggccacgacgacccgttggcgctcgacaccctgcgcgcctatttccagcgcctctac
tggcagcgcgggccggaggagttggacgccgccctggtcggcgacgggccggcgccgatc
cgtggcatcctcaaggcgctcgacctctacaagagcgaccgcgaataccccttcgccgac
atcgccaaggccttccggatcatcgaatccccgctggtgccggtcatcgtcccgtacaag
ccggccggcgacccggatgtggttcagcggctgctggagaccttgaagcgtctgccggcg
gaaaagaccggcggcatcgcgcgggcactccagccctatctggtgcagatcccgcgcagc
gcccgcaacgccctgctggccgccgggtcggccgagtgcgtccggggggatgagttcggc
gatcagttcgtgtcgctggtcaacggcgacctctaccaccccgatgtcgggctggactgg
gaggatccgaccttccgcaagatcgaaaccggcatcttctga

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