Azospirillum doebereinerae: ACIU1J_07460
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Entry
ACIU1J_07460 CDS
T10877
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
adj Azospirillum doebereinerae
Pathway
adj00300
Lysine biosynthesis
adj00470
D-Amino acid metabolism
adj01100
Metabolic pathways
adj01110
Biosynthesis of secondary metabolites
adj01120
Microbial metabolism in diverse environments
adj01230
Biosynthesis of amino acids
Module
adj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACIU1J_07460 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACIU1J_07460 (dapF)
Enzymes [BR:
adj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACIU1J_07460 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XKH33565
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Position
contig_1:1524971..1525810
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AA seq
279 aa
AA seq
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MTREFLKMHGLGNDFVVIDARSTPYSPAAAEVRAIADRRTGVGCDQFIVLEPSNIPGASG
FMRIRNADGSEAGACGNASRCIGWLLLEESGADRASFETAAGLLHASRADHGHITVDMGP
PRLDWDAIPLAAPADTLRVAAVEHAGFAGPVAVNMGNPHAVFFVDDAEAVPLDEVGPVFE
NHPAFPERANIEFAQVLSPTAIRMRVWERGAGVTQACGSGSCATLVAAVRRGLTARKADI
LLDGGTLTIEWTEDDRVLMTGPVALSFSGRLSAEMVAGL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgaattcctgaagatgcacgggctcggcaacgacttcgtcgtgatcgacgcc
cgctccacgccgtactccccggccgccgccgaggtgcgcgccatcgccgaccgccgcacc
ggcgtgggctgcgaccagttcatcgtgctggagccgtcgaacattccgggcgccagcggg
ttcatgcgcatccgcaacgccgacggcagcgaggccggggcctgcggcaacgcgtcccgc
tgcatcggctggctgctgctggaggaatccggcgccgatcgcgccagcttcgagaccgcc
gccggcctgctccacgcgtcgcgcgccgaccatggccacatcaccgtggacatggggccg
ccgcgcctggattgggacgcgatcccgctggccgcgcccgccgacacgctgcgggtcgcg
gcggttgagcacgccggcttcgccggtccggtcgccgtcaacatgggcaacccgcacgcc
gtcttcttcgtggacgacgccgaggccgtgccgctcgacgaggtcggcccggtgttcgag
aaccaccccgccttccccgagcgcgcgaacatcgagttcgcccaggtgctctcgcccacc
gccatccgcatgcgggtgtgggagcgcggggcgggcgtcacccaggcctgcggcagcggc
tcctgcgcgacgctggtcgcggcggtgcggcgcggcctgaccgcgcgcaaggccgacatc
ctcctcgacggtggtaccctgaccatcgagtggaccgaggacgaccgcgtcctgatgacc
ggcccggtggcgctgagcttcagcggccggctgtcagccgagatggtcgcgggattgtga
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