Azospirillum doebereinerae: ACIU1J_08225
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Entry
ACIU1J_08225 CDS
T10877
Name
(GenBank) TrmH family RNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
adj Azospirillum doebereinerae
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adj03009
]
ACIU1J_08225
03016 Transfer RNA biogenesis [BR:
adj03016
]
ACIU1J_08225
Ribosome biogenesis [BR:
adj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACIU1J_08225
Transfer RNA biogenesis [BR:
adj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ACIU1J_08225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
XKH33700
LinkDB
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Position
contig_1:1690012..1690851
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AA seq
279 aa
AA seq
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MPPRGRPPLPHRPRAAARPPGPPVPQPASHLEEPRAKLFRVSGLSAVSALFAHEPERVER
LFFDERLKPAVGGFCKAMAAARKPYRMVEGEELAKVAGTVLHGGVVALMAPRVLPAFDTE
AAKRWSEPLLILDGVGNPHNLGAILRTAAFFGLPRVVLSDHPGQAAPSEAAYRVAEGGFE
WVELYQAANLPVLLKRLRATHRVFGTALDPKRPSVDAGGLTGGPKPVALVMGNEEDGIPP
ATLAACDTVLTIPGSGRVQSLNVAATAAILIHGLATAGG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcgcgggcgcccgccccttccccaccgcccccgagccgccgcccggccgccc
ggcccgccagtcccccaacccgcctcccacctggaggagccgcgcgccaagctgttccgc
gtctccggcctctccgccgtgtcggccctgttcgcgcatgagccggagcgggtcgagcgg
ctgttcttcgacgagcggctgaaaccggcggttggcggcttctgcaaggcgatggccgcc
gcgcgcaagccctaccgcatggtggagggcgaggagttggcgaaggtcgccggcaccgtg
ctgcacggcggcgtcgtggccctgatggcgccgcgcgtcctgccggccttcgacaccgag
gcggccaagcgctggagcgagcctctgctgatcctcgacggcgtcggcaacccgcacaat
ctgggcgccatcctgcggaccgccgccttcttcgggctgccgcgcgtggtgctgtccgac
catccggggcaggcggccccgtccgaagccgcctaccgcgtcgccgagggcggcttcgaa
tgggtagagctttaccaggcggcgaacctgccggtgctgctcaagcgtctgcgggcgacc
caccgggtctttggcacggcgctggatcccaagcggcccagcgtcgacgccggcggcttg
acgggtggaccgaagccggtcgccctggtgatgggcaacgaagaggacggcatcccgccc
gccacgctggccgcctgcgacacggtgctgacgatccccggcagcggccgggtccagtcg
ctgaacgtcgccgccaccgccgccatcctcattcacggtttggcaaccgccggagggtga
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