Azospirillum doebereinerae: ACIU1J_11170
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Entry
ACIU1J_11170 CDS
T10877
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adj Azospirillum doebereinerae
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adj03016
]
ACIU1J_11170 (truB)
Enzymes [BR:
adj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACIU1J_11170 (truB)
Transfer RNA biogenesis [BR:
adj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACIU1J_11170 (truB)
Prokaryotic type
ACIU1J_11170 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XKH34234
LinkDB
All DBs
Position
contig_1:complement(2252512..2253450)
Genome browser
AA seq
312 aa
AA seq
DB search
MARKRKGEPIHGWIILDKPEGMSSTQALSKVRRLLNAEKGGHGGTLDPLATGILPIALGE
ATKTVSYAMDGAKTYRFSVRWGERTSTDDREGEVIDRSDHRPTTEAIQGALPAFLGDLDQ
VPPQFSAIKIGGERAYDIAREGDVVDLASRTVRIDRFELVEQPDADHAVFEVDCGKGTYV
RSLARDLAEALGTVGHVALLRRLRVGPFTLDGAISLDELATLEQGAAVERLLLPIETALD
DIPALALTEAEAHRLRHGQTVALLTRQDRERLEALRGTGDGDGTVIALFGGKPVALARVE
GAEVRPVRVLNL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgtaagcgcaagggcgagccgatccatggctggatcattctcgacaagcccgaa
ggcatgagctcgacccaggcgctgtccaaggtgcggcgcctgctgaacgcggagaagggc
ggccatggcggcacgctcgacccgctcgccaccggcatcctgccgatcgcgctgggcgag
gcgaccaagaccgtctcctacgccatggacggcgccaagacctaccggttcagcgtccgc
tggggcgagcgcaccagcaccgacgaccgcgagggcgaggtcatcgaccgttccgaccat
cgccccaccaccgaggcgatccagggcgccctgcccgccttcctgggcgatctcgaccag
gtgccgccgcagttcagcgccatcaagatcggcggcgagcgcgcctacgacatcgcccgc
gagggcgacgtggtcgatctggcctcgcgcaccgtccgcatcgaccgcttcgagctggtc
gagcaacccgacgccgaccacgcggtgttcgaggtcgattgcggcaagggcacctacgtc
cgctcgctcgcccgcgatctggccgaggcgctgggaacggtcgggcatgtggcgcttctg
cgccgtctgcgcgtcggtcccttcacgctggacggcgcgatttccctggacgaattggca
accttggagcaaggtgccgccgtcgaacgacttttgctgccgatcgagaccgcgctggac
gacatcccggcgctggccctgacggaagcggaagcgcaccgactgagacatggccagacg
gtggctctcctcacccggcaggaccgcgaacgcctcgaggcgcttcgggggactggcgat
ggggatggcaccgtcattgcgcttttcggcggaaagccggtggcgctggcgcgtgtcgag
ggggcggaggtccgtccggtgcgtgtgctcaacctttga
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