Azospirillum doebereinerae: ACIU1J_12705
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Entry
ACIU1J_12705 CDS
T10877
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
adj Azospirillum doebereinerae
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adj03032
]
ACIU1J_12705 (ihfB)
03036 Chromosome and associated proteins [BR:
adj03036
]
ACIU1J_12705 (ihfB)
03400 DNA repair and recombination proteins [BR:
adj03400
]
ACIU1J_12705 (ihfB)
DNA replication proteins [BR:
adj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACIU1J_12705 (ihfB)
Chromosome and associated proteins [BR:
adj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACIU1J_12705 (ihfB)
DNA repair and recombination proteins [BR:
adj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACIU1J_12705 (ihfB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
XPC-binding
Motif
Other DBs
NCBI-ProteinID:
XKH36047
LinkDB
All DBs
Position
contig_1:2571730..2572011
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AA seq
93 aa
AA seq
DB search
MTKSELIQRLAERNPHLYQRDIEKIVGTIFDEITEALARGDRVELRGFGAFSIKRRDART
GRNPRTGESVDVGEKCIPFFKTGKQLRERLNTD
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcggaattgatccagaggctggcggagcggaatccgcatctgtaccagcgc
gacatcgaaaagatcgtgggcaccatcttcgacgagatcaccgaggcgctggcccgcggc
gaccgggtcgagctgcggggattcggcgccttttcgatcaagcggcgcgacgcgcgcacc
ggccgcaacccccgcaccggagaatcggttgacgtgggcgagaaatgcatccctttcttc
aagaccgggaaacagctccgggaacggctgaacacggattga
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