Azospirillum doebereinerae: ACIU1J_16895
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Entry
ACIU1J_16895 CDS
T10877
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
adj Azospirillum doebereinerae
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adj03009
]
ACIU1J_16895 (rimO)
Enzymes [BR:
adj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACIU1J_16895 (rimO)
Ribosome biogenesis [BR:
adj03009
]
Prokaryotic type
ribosomal protein modification factors
ACIU1J_16895 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XKH36106
LinkDB
All DBs
Position
contig_2:613819..615162
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AA seq
447 aa
AA seq
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MTATSVSKSAPKVGIVSLGCPKALVDSERILTRLRAEGYEISASYDGADVVLVNTCGFLD
SAKKESLDAIGEAIKENGRVIVTGCMGVEPDVIRQTHPGVLAVTGPHQYEQVVTAVHDAL
PPRHDPFTDLVPPEGLRLTPRHYAYLKISEGCNNRCTFCIIPSIRGDLVSRPITSVLREA
EKLAVAGVKELLVISQDTSAYGIDTKFKEEMWYDRTVRTRFFDLCKELANFDLWVRLHYV
YPYPHVDEVIPLMAEGKILPYLDIPFQHASPKVLKAMRRPAAQEKQLDRIRKWRDECPHL
VLRSTFITGFPGETEEDFQFMLDWLKEAQLDRVGCFKYEPVEGAVANDIPGAVPEEVKQE
RWERFMETQKAISAERLQQKVGYTLGVLIDEVDEDGAIGRSYADAPEIDGSVFLNGETGL
KPGDMVDVTIEHADEYDLWGSVERDDA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacgtccgtttcaaagtccgccccaaaggtcggcatcgtcagcctcggctgc
ccgaaggcgctcgtcgattccgagcgcatcctgacccgtctgcgcgccgaggggtacgag
atttcggcctcctacgacggcgccgacgtggtgctcgtcaacacctgcggcttcttggac
agcgccaagaaggaatcgctggacgccatcggcgaggcgatcaaggagaacgggcgggtc
atcgtcaccggctgcatgggcgtggagccggacgtgatccggcagacccatccgggcgtg
ctcgccgtcaccggtccccaccagtacgaacaggtggtcaccgccgtccacgacgcgctg
ccgccgcgccacgaccccttcaccgatctggtgccgcccgaagggctgcgcctgaccccg
cgccactacgcctatctgaagatttccgagggctgcaacaaccgctgcaccttctgcatc
atcccgtcgatccgcggcgatctggtcagccgccccatcacctcggtgctgcgcgaggcc
gagaagctggcggtcgccggcgtcaaggaactgctggtcatctcgcaggacaccagcgcc
tacggcatcgacaccaagttcaaggaagagatgtggtacgaccgcacggtccgcacccgc
ttcttcgacctgtgcaaggaactggcgaacttcgacctgtgggtccgactgcactacgtc
tacccctacccgcacgtcgacgaggtcatcccgctgatggcggagggcaagatcctgccc
tacctcgacatcccgttccagcacgcctcccccaaggtgctgaaggcgatgcgccgcccg
gccgcccaggaaaagcagctcgaccgcatccgcaagtggcgtgacgagtgcccgcatctg
gtgctgcgctccaccttcatcaccggcttccccggcgagacggaggaggacttccagttc
atgctggactggctgaaggaggcccagctcgaccgcgtcggctgcttcaagtacgagccg
gtcgagggcgccgtcgccaacgacatccccggcgccgtccccgaagaggtcaagcaggag
cgctgggagcgcttcatggagacccagaaagccatcagcgccgaacggctccagcagaag
gtgggctacacgctgggcgtgctgatcgacgaggtcgacgaggacggggccatcggccgc
tcctacgccgacgcgccggagatcgacggcagcgtgttcctgaacggcgagaccggcctc
aagccgggcgacatggtggacgtcaccatcgagcacgccgacgagtacgatctgtggggc
agcgtcgaacgcgacgacgcctga
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