Azospirillum doebereinerae: ACIU1J_20660
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Entry
ACIU1J_20660 CDS
T10877
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
adj Azospirillum doebereinerae
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adj03021
]
ACIU1J_20660 (rpoH)
Transcription machinery [BR:
adj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACIU1J_20660 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
UCR_14kD
HTH_3
GntR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
XKH37758
LinkDB
All DBs
Position
contig_3:complement(267051..267923)
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AA seq
290 aa
AA seq
DB search
MSTALALRSTDSGELLSRYINETHRYPVLAANDEFMLAKAWTEHGDVKAAHALVTSHLRL
VVKIASGYRGYGLPLTDLVAEGNLGLMTAVKKFEPDRGFRLSTYAMWWIKASIQDYILRS
WSLVKIGTTAAQKKLFFSLGRLKRKLGELGSGDLLPENVTRIANDLEVGESDVVTMNRRL
SGPVASLNAPIASEGDSEWQDLLADERPTVEDTLVERGEAGRRSALLRAAMDVLNERERD
ILTSRRLSEKPLTLEDLAVRYGVSRERIRQIEERAFAKVAKQTLQLAAAA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcacttgcgctccgttcgaccgattccggcgaattgctgtcccgctacatc
aacgagacccaccgctacccggtcctggccgcgaacgacgagttcatgctggccaaggcg
tggaccgagcacggcgacgtcaaggccgcgcacgcgctggtcaccagccatctgcggctg
gtcgtgaagatcgccagcggctatcgcggctacggccttccgctgaccgatctggtcgcc
gagggcaacctcggcctgatgaccgccgtcaagaagtttgaacccgaccgtggcttccgc
ctgtccacctacgcgatgtggtggatcaaggcctcgatccaggattacatcctgcggtcc
tggagcctcgtgaagatcgggaccaccgccgcgcagaagaagctgttcttcagcctgggc
cgcttgaagcggaagctgggcgaactgggcagcggcgacctgctgccggagaacgtcacc
cgcatcgccaacgacctggaggtcggcgagagcgacgtggtgacgatgaaccgccgcctg
tcgggtcccgtcgcctcgctgaacgcgcccatcgcgtcggaaggcgattcggaatggcag
gacctgctggccgacgagcgtccgaccgtcgaggacacgctggtcgagcgcggcgaggcc
gggcggcgcagcgccctgctgcgcgcggcgatggacgtgctgaacgagcgggaacgcgac
atcctgacctcgcgccgcctgtccgagaagccgctgacgctggaggatctggccgtccgc
tacggcgtcagccgcgagcgcatccgccagatcgaggagcgggccttcgccaaggtcgcc
aagcagacgctgcaactggccgcggcggcgtaa
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