Azospirillum doebereinerae: ACIU1J_25045
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Entry
ACIU1J_25045 CDS
T10877
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
adj Azospirillum doebereinerae
Pathway
adj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACIU1J_25045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adj03400
]
ACIU1J_25045
Enzymes [BR:
adj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACIU1J_25045
DNA repair and recombination proteins [BR:
adj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACIU1J_25045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
XKH38477
LinkDB
All DBs
Position
contig_4:complement(101058..102464)
Genome browser
AA seq
468 aa
AA seq
DB search
MLPVTLGEGADLDGFRRAVRRLIAADAAPEAVLWNGGALSLFGDATEPALGSDPPPVSLP
RAVGALIETVVCHRDPERYALLYRLVWRVLGGERALLDQHADPLVHRLARLDKAVRRDLH
KMHAFVRFRELRDADGDARYVAWFEPDHFIVEAAAPFFVERFESMVWSILTPVGALHWDR
RSLTVGPGAVRPNGLADDGFAEGWQRYYESTFNPARVNPTAMRAEMPRKYWANLPETAAI
PALVRSAPARVRAMIEAEAAIPRHRAPDKAVAAMARQEPETLAALNQLIARSEPLVPGAT
RAVLGEGPLGAALAIVGEQPGDQEDRQGRPFVGPAGQLLTAALEEAGIDRAQAYLTNAVK
HFKFVQRGERRIHQSPTAGEVKHYRWWLMKELGLVRPRLVVALGATAALALAGRSVSVLR
ERGTMSFGDWDGFVTVHPSYLLRLPDEGQRERARSDFVADLRRVSGLL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcttccggtgacgctgggggagggggcggatctcgacggtttccgccgggcggtgcgg
cggctcattgccgccgatgcggcgcccgaggcggtgctgtggaacggcggagccttgtcg
ttgttcggcgatgccaccgaaccggcccttgggagcgacccgccgccggtctccctgcca
cgggcggtgggagcgctgatcgagacggtggtctgccaccgcgacccggaacgctacgcc
ctgctctatcggttggtctggcgggtgctgggaggcgagcgggcgttgctcgaccagcac
gccgacccgctcgtgcaccggctggcgcggctcgacaaggcggtgcggcgcgaccttcac
aagatgcacgccttcgtgcgtttccgtgaactgcgggacgcggacggcgacgcgcgctac
gtcgcgtggttcgagcccgaccatttcatcgtcgaggccgccgcccccttcttcgtcgag
cgtttcgagagcatggtgtggtcgatcctgaccccggtcggcgcgctgcactgggaccgg
cgcagcctgacggtcgggccgggggcggttcggccgaatggtttggcggatgacgggttc
gccgagggttggcagcgctattacgagagcaccttcaaccccgcgcgggtcaacccgacg
gcgatgcgggcggaaatgccccgaaaatactgggccaacctgccggaaaccgccgccatc
cccgcccttgtccgctccgcccccgcccgtgtccgggcgatgatcgaggcggaggccgcc
atcccccgccaccgcgcgcccgacaaggcggtcgccgccatggcgcggcaggaaccggag
acgctggccgcgctgaaccaactcatcgcgcgctccgaaccgctggtgccgggcgcgacg
cgggcggtgttgggggagggaccgctcggcgcggcgcttgccatcgtcggcgagcagccg
ggcgaccaggaggaccggcagggacggccgttcgtcggtccggccggccagttgctgacc
gccgcgctggaggaggccggcatcgaccgcgcccaagcctatctgaccaacgcggtcaag
catttcaaattcgtccagcgcggcgaacgccgcattcaccaatctcccaccgccggggaa
gtgaagcattaccgttggtggctgatgaaggaactgggcctcgtccggccgcgccttgtc
gttgcgctgggggcgaccgccgccctggccctggccggtcgcagcgtttcggtgctgagg
gagcgggggacgatgagcttcggggactgggacgggttcgtcaccgttcacccgtcctat
cttttgcggctgccggatgaagggcagagggaaagggcgcgctcggattttgtcgccgat
ctgcggcgcgtgtcgggcctgctttga
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