Azospirillum doebereinerae: ACIU1J_27535
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Entry
ACIU1J_27535 CDS
T10877
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
adj Azospirillum doebereinerae
Pathway
adj02020
Two-component system
adj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACIU1J_27535
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACIU1J_27535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adj03000
]
ACIU1J_27535
Transcription factors [BR:
adj03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
ACIU1J_27535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
Rrf2
HTH_IclR
Crp
MarR
HTH_29
HTH_23
HVO_A0261_N
HTH_3
DUF7343
HTH_24
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
XKH38226
LinkDB
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Position
contig_4:complement(686203..686955)
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AA seq
250 aa
AA seq
DB search
MGQKSETSDSNESPAARILPRLVTEIRLYHYKMITHEHVAHLRSCQFFNNPTGSTLWRLV
DAAELRLFVARQMIFRAGDPGDALYVLVEGAVRITVAEGRHSLQLSVVHPPAAVGVVGAL
DGLERTATAIAETDAALLRIGRDDLWAILAPDPVMMRGAVDAAAAVARKAAQAEAALLLS
QPQRLAGLLLTLADQGGRVRLTQAELAGMLGTSRSHIVRMLGAFRAAGLIATSPGVILVL
DRDGLARVDA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggggcagaaaagcgaaaccagcgactcaaatgagtcaccggcggcaagaatattgcct
cgacttgtaacagaaatccgcctctaccattacaagatgataacccacgagcacgtcgcg
caccttcgatcatgtcagttcttcaataatccaacgggttcaaccctctggagactggtc
gatgccgcagaactgcgtctgttcgtcgcgcgacaaatgatcttccgggcgggcgatccc
ggcgacgctttgtacgtgctggtcgagggggcggtgcggatcacggttgctgaaggccgg
cactcgttgcagctctccgtcgtccacccaccggctgccgtgggcgtggtcggggcgctg
gatgggctggagcgcacggcaacggccatagcagagacggacgcggcgctgctgcggatc
ggtcgtgacgacctgtgggcgatcttggcgccggacccggtgatgatgaggggcgcagtg
gacgccgccgccgccgtcgcccggaaggccgcccaggccgaggccgctttgctactcagc
cagccccagcggctggccgggctactgctgacgctggccgatcagggcggccgcgtgcgg
ctgacgcaggcagagcttgccggcatgctgggcaccagccgcagccacatcgtgcggatg
ctgggggccttcagggcggccgggctgatcgccacgtcgccgggcgtgatcctggtgctg
gaccgcgatgggctggcgcgcgtggacgcctga
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