Azospirillum doebereinerae: ACIU1J_30440
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Entry
ACIU1J_30440 CDS
T10877
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
adj Azospirillum doebereinerae
Pathway
adj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
adj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ACIU1J_30440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
adj02000
]
ACIU1J_30440
02044 Secretion system [BR:
adj02044
]
ACIU1J_30440
Transporters [BR:
adj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ACIU1J_30440
Secretion system [BR:
adj02044
]
Type I secretion system
Adhesin protein transporter
ACIU1J_30440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_29
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XKH38863
LinkDB
All DBs
Position
contig_5:complement(440965..444963)
Genome browser
AA seq
1332 aa
AA seq
DB search
MQPASPSPISKAEAAKAASERDRAAEGAARRLLSGMLGLRRDKGVLVLASFALNIFGLAL
PVTLLHVYDRILPNESYGTMTLLGIGCALAAVMEAVLRVTRSALTTWMGARIEHQSSGSL
IERLMRMPLNAFSHQGIGTHFEVYRAIKMVREFYSGQALQSAIDIPFAILYLGLIALLAG
WLVLIPLAVLGLFLIVGSVLGTRMRRALEDRHTLEERRLNFISEVLSGVHTVKGLGAEAG
LLRRHERLQQGCSEEDFNVARLSGTASVVATTLAQATMMLVVIVGSVSVIDGAMTTGVLT
ACSMLAGRCVQPVQALFDRWVRYQSVSLALRRIGHVLLEVEPAAEAASAVGTAVGPALAP
GSIEMDSVRFSYDRGPEILHELSLSVGPGELLGVVATNASGKTTLLRLILGALRPTAGAV
RVGVRGSDSGAAGAEMGGIGGVVYVGENPELFKGTILQNLTLFDPSRADLAMEVCRRFGL
DRRIASLPQGYETIVGDASQEALPRGARQMICLARALVREPAVLLLDEPNSSLDVQSDTV
FRRALEELRGSVTILLVTSRPSLLTLADRVIQIVDGRVVGRPEPGADQPGAQPAAQPVLV
SSSPAPTPGGAPADKAEPIKAAHDDSDALRRRLSESSEVGACMIPLLDALGWRGGPLALA
EALPHFSEVQTVEELCDVFQRLNFEGRSLRVDLATVEASHLPCLFRGRDGAVHTLLSVGA
DGVAAFSGRARAEVTLTAGKGTAYVFVPVDSSAVAQNWVATVLQGFVPLLWAVLGLSAVI
NLLSIAAPLFTMAIYDKVITTGSIETLVTIAVGAVLVVGGDFALRQIRGRALAHAGSRIA
RSISNATIDRILMLPVGMSERANIGTQIARVKDLESIRDFISQGQVAALFDVPFALFYMA
VMAILGGPLALVPLGAVLLTAAIGAAIHPLVRARTAATARADTERQEFFVEMVAKMPALR
AVGGLAHWRDRYDQLSARTARSGHAAANLSATHVALAGLVVPAAGLATVGIGAVQVFSGA
MTPGALMASMMLLWRVMVPLQTAVTMLPRIEQLRANARQINNLMSIRPEREPRCATLPPR
KLKGEVSFSRVSLRYRNDADPALVGVSFTVKPGQIVAIVGPDGAGKSSMLKVMLGLYPPQ
AGNVRIDGVDIRQMDPIDMRKSIGYVPQASTLFYGTVAQNLRFADETADEAEMRWALSLA
GALDEVEALSKGLHTRIGDNQSMRLSPSLTQKICLARAYIRRPRILLLDEPASRLDFEGD
KALHAALTALRGHSTIFLVTHRPSHLTLADSVMTMDAGMIAPAKTAPMSGLPGPGGAGGI
NRPLGLASMLPR
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcccgcatccccgtcacccatcagcaaagccgaagccgccaaggccgccagcgag
cgcgaccgggccgccgaaggcgccgcccgccggctcctgtcgggcatgctcggcctgcgc
cgcgacaagggcgtgctggtgctggcctccttcgcgctgaacatcttcggcctggcgctg
ccggtgacgctgctgcacgtctacgaccgcatcctgcccaacgagtcctacggcaccatg
acgctgctgggcatcggctgcgccctggcggcggtgatggaggcggtgctgcgggtgacc
cgctcggcattgaccacctggatgggcgcgcgaatcgagcaccagtccagcggctcgctg
atcgagcggctgatgcgcatgccgctgaacgccttctcccatcagggcatcggcacgcat
ttcgaggtgtaccgcgccatcaagatggtgcgggagttctactccggccaggcgctgcaa
tcggccatcgacattcccttcgcgattctctacctgggcctgatcgcgctgctggccggc
tggctggtgctgatcccgctggcggtgctggggctgttcctgatcgtcggctccgttctc
ggcacgcggatgcgccgggcgctggaggaccgccacaccctggaagagcgccgcctgaac
ttcatcagcgaggtgctgagcggcgtccacaccgtcaaggggctgggcgccgaggccggg
ctgctgcggcgccacgaacgcctgcagcagggctgcagcgaggaggacttcaacgtcgcg
cggctgagcggcaccgcctcggtcgtcgccaccaccctggcgcaggccacgatgatgctg
gtggtgatcgtcggcagcgtgtcggtgatcgacggggcgatgacgaccggcgtgctgacc
gcctgctcgatgctggccggacgctgcgtgcagccggtgcaggcgctgttcgaccgctgg
gtgcgctaccagtcggtgtccctggcgctgcgccgaatcggccatgtgctgctggaggtc
gagccggccgccgaagccgcatcggccgtcgggacggcggttggcccggccctggccccc
ggctccatcgagatggacagtgtccgcttttcttatgaccgcggcccggagatcctgcac
gagctgtcgctcagcgtcggccccggcgagcttctgggcgtggtggcgaccaacgcgtcg
ggcaagacgacgctgctccgcctgatcctcggcgccctgcgcccgacggccggggcggtg
cgcgtcggcgtgcgcggttccgactcgggcgccgccggggcggagatgggcgggatcggc
ggcgtcgtctacgtcggcgagaatccggagctgttcaagggcaccatcctccagaacctg
acgctgttcgaccccagccgggccgatctggcgatggaggtctgccgccgcttcgggctg
gaccgccgcatcgccagcctgccgcagggctacgagaccatcgtcggcgacgcctcgcag
gaggcgctgccgcgcggcgcccgccagatgatctgcttggcccgcgcactggtgcgcgaa
ccggcggtgctgctgctggacgagccgaactcctcgctcgacgtgcaatccgacaccgtg
ttccgccgcgcgctggaagagctgcgcggcagcgtcaccatcctgctggtgaccagccgc
ccgtccctgctgacgctcgccgatcgggtcatccagatcgtcgacggccgcgtggtcggc
cggccggaacccggcgccgaccagcccggcgcccagcccgccgcccaaccggttctcgtc
tcctcctcccccgcccccacccccggcggggctccggccgacaaggccgagccgatcaag
gccgcgcacgacgacagcgacgcgctgcgccgccgcctgtcggaatcgtcggaggtcggc
gcctgcatgatcccgctgctcgacgcgctgggctggcgcggcgggccgctggcgctcgcg
gaagccctgccccacttctcggaggtgcagacggtcgaggagctgtgcgacgtcttccag
cgcctgaatttcgaggggcggagcctgcgcgtcgatctcgccaccgtcgaggcctcccac
ctgccctgcctgttccgggggcgcgacggcgcggtccacaccctgctgtcggtcggcgcg
gacggggtcgccgccttcagcggccgcgcgcgcgccgaggtcacgttgaccgccggcaag
ggtaccgcctacgtcttcgttccggtcgactccagcgccgtcgcccaaaactgggtcgcc
acggtgctgcagggcttcgtgccgctgctgtgggcggtgctgggcctgagcgccgtcatc
aacctgctgtccatcgcggccccgctgttcaccatggcgatctacgacaaggtgatcacc
accgggtcgatcgagacgctggtcaccatcgccgtcggcgcggtgctggtggtgggcggc
gatttcgccctgcgccagatccgggggcgcgcgctggcccatgccgggtcgcgcatcgcc
cgctcgatcagcaacgccaccatcgaccgcatcctgatgctgccggtcggcatgagcgag
cgggccaacatcggcacccagatcgcccgcgtgaaggatctggaatcgatccgcgacttc
atcagccaggggcaggtcgccgccttgttcgacgtgcccttcgccctgttttacatggcg
gtgatggccatcctcggcgggccgctggcgctggtgccgctgggcgccgtgttgctgacc
gccgccatcggcgccgccatccacccgctggtgcgcgcccgcaccgccgccaccgcgcgg
gccgacaccgagcggcaggaattcttcgtcgagatggtcgccaagatgccggcgctgcgc
gccgtcggcgggctggcccattggcgcgaccgctacgaccagctctcggccaggaccgcg
cgctccggccacgccgccgccaacctgtcggccacccacgtggcgctggccggtctggtg
gtgcccgccgccgggctcgccaccgtcggcatcggtgccgtgcaggtgttcagcggcgcg
atgacgccgggcgcgctgatggcgtcgatgatgctgctgtggcgggtgatggtgccgttg
cagaccgccgtcaccatgctgccgcgcatcgagcagctgcgcgccaacgcccgccagatc
aacaacctgatgagcatccggcccgagcgcgagccgcgctgcgccaccctgccgccgcgc
aagctgaagggcgaggtgtccttctcgcgcgtgtctctgcgctaccggaacgacgccgat
ccggcgctggtcggcgtgtccttcacggtcaagccggggcagatcgtcgccatcgtcggg
ccggacggcgccggcaagtcgtcgatgctgaaggtcatgctggggctgtatccgccccag
gccggcaacgtgcggatcgacggcgtcgacatccggcagatggatcccatcgacatgcgc
aagtcgatcggctacgtgccccaggccagcacgctgttctacggcactgtcgcgcagaac
ctgcgcttcgccgacgagaccgccgacgaggccgagatgcgctgggcgctgtcgctggcc
ggcgcgctggacgaggtcgaggcgctgtccaagggtctgcacacccgcatcggcgacaac
cagtcgatgcgcctgtcgcccagcctgacgcagaagatctgcctggcccgcgcctacatc
cgccgtccgcgcatcctgctgctcgacgagccggccagccggctggacttcgagggcgac
aaggcgctgcacgccgcgctcaccgccctgcgcggccacagcacaatcttcctcgtcacc
caccggccgagccacctgaccctggccgattcggtgatgaccatggacgccggcatgatc
gccccggcgaagaccgccccgatgtccggcctgcccggaccgggcggcgccggcgggatc
aaccgtccgctcggcctcgcctcgatgctgccccgctaa
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