Alicycliphilus denitrificans K601: Alide2_0117
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Entry
Alide2_0117 CDS
T01463
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
adk
Alicycliphilus denitrificans K601
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
MASE3
GGDEF
PAS_4
PAS
PAS_9
PAS_3
GAF_2
PAS_8
Motif
Other DBs
NCBI-ProteinID:
AEB82555
UniProt:
F4GCV2
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All DBs
Position
complement(128132..131434)
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AA seq
1100 aa
AA seq
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MMHPTHRTELRKSLYWLAGLLAGLLLVQLFPAPDAARGLARYLPLHTSMEVLSIAMAAMV
FGIAWATQKYRPNGRDLVLGPGLLGVAILDMSHCLSYAGMPDFITPNGPEKAILFWLAAR
SLAALALLCAAFWPQRHDNRLGPRARCWSLACVLLFVGAVHYVVLLHPQSVPPTFIPDVG
LTKFKIDFEYGLIAAYVLAGMGFLTHLRQDREFGLTRLALAAFTMAMGEFFFTLYANVTD
IYNVTGHLYKIMACAFLYRGLFVETVQAPYQELQASEAQHRAMLDTLPDLLFELNRQGVY
LSVHANDASKLAAPAGQLLGRRLGEILPAQAAAACLDALAEAERSGVARGQRFRLALPSG
VHHFELAIARKANPAGREDTYLTLVRDITATVHDEQRIAFEARLNASLLDLQHSDVQELE
ADFLQRGIRHVERLTHSPFAVLHFVHDGQDPELAACSAGAAGGMPAQAEVWRQECAAQRI
QNQPPPGDALLRWMSLPVQEGGRTRMLLGVANKAEDYDRQDAQALQALAYAIWRRVVQRR
QDAVILRLSEALEQSPHQVVITDVRANVLYVNRAFSEVSGYSAQEILGKNPRMLQSGLTP
RSVYEEMWRRLPQGQPWQGELVNRRKNGHIYTEIVSLYPIRDLSGQVTHYVAHKEDITVQ
REAEERIQALSNFDTLTGLLNKKSFDERLALAIERAGASHGRLSMLWFDLDNFKLINESL
GHTAGDELLVEAANRLRSCLGTQNALARYSGDAFVAIVPQADQASVALMAQEALRLLQTA
TSVQGHPVSVSASAGVAVYPDDARTAGTLASAAELAMYRVKEDGRNGLRFFAPEMQAHTQ
RSLELAAGLKDAARKGELFLVYQPQRALGSGALVGAEALLRWRHPQWGLVSPAEFIPIAE
QSGAITAIDFWVVEQAAQQLRAWDAAGLPPLVVAVNVSAAQFARPQLAEELLHILQRVDV
SPQRIEVELTEAVALKHPELAETTIRRLHDMGFKVALDDFGTGYSSMSYLKRYTIDKLKI
DQSFVRELAEKTSDMAIVTAIVRMAHSLHLSTLAEGVETAEQAALLHDCGCDEIQGYWYS
RPLEPRAFEAFAKGLPQRGA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaccccacacatcgaacggagcttcgcaaatccctctactggctcgccggcctg
ctggccgggctgttgctggtgcagctgttcccggcgcctgacgccgcccggggcctggcg
cgctacctgccgctgcacacgagcatggaggtgctctccatcgccatggcggccatggtg
ttcggcattgcctgggccacgcagaaataccggcccaacgggcgcgacctcgtcctcggc
ccgggcctgctgggcgtggccatcctggacatgagccactgcctgtcctacgcgggcatg
ccggacttcatcacccccaacgggccggaaaaagccattcttttctggctggcggcgcgc
agcctcgcggccctggccctgctgtgcgcggccttctggccgcagcgccacgacaaccgg
ctgggcccgcgcgcgcgctgctggagccttgcgtgcgtgctgctgttcgtgggcgcggtg
cactacgtggtgctgctccacccgcagtcggtgccgcccaccttcatcccagacgtgggg
ctgacgaaattcaagatcgacttcgagtacggcctgatcgccgcctacgtgctggcgggc
atgggctttctgacgcatctgcgccaggaccgcgaattcggcctgacgcgcctggcgctg
gccgcattcaccatggccatgggcgagttcttcttcacgctctacgccaacgtcaccgac
atctacaacgtgaccgggcacctctacaagatcatggcctgtgccttcctgtaccggggc
ctgttcgtggagacggtgcaggcgccgtaccaggagctgcaggcttccgaggcccagcac
cgggccatgctggacacgctgcccgacctgctgttcgagctgaaccgccagggcgtctac
ctgtcggtgcacgccaacgacgcgagcaagctggcggcgccggccggccagctgctgggc
aggcggctcggcgagatcctgcccgcgcaggccgccgccgcgtgcctcgacgcgctggcc
gaggccgagcgcagcggcgtggcccgcggccagcgcttccgcctagcgctgccgtccggc
gtgcaccacttcgagctagccatcgccaggaaggccaatcccgcggggcgcgaggacacc
tacctgaccctggtgcgggacatcaccgccacggtgcacgacgagcagcgcatcgcgttc
gaggcccgcctgaacgcgagcctgctggacctgcagcacagcgacgtccaggagctcgag
gcggacttcctgcagcgtggcatccggcatgtcgagcggctcacgcacagtccgttcgcc
gtcctgcatttcgtgcacgatggccaggaccccgagctcgcggcctgttcggcgggagcg
gcgggcggcatgccggcccaggcggaagtctggcgccaggagtgcgccgcccagcgcatc
cagaaccagccgccgcccggcgacgccctgctgcgctggatgagcctgcccgtgcaggaa
ggcggccgcacgcgcatgctgctgggcgtggccaacaaggccgaggactacgacaggcag
gacgcccaggcgctgcaggccctggcctacgccatctggaggcgcgtggtgcagcgccgc
caggatgcggtcatcctgcgcctgtccgaagcgctggagcaaagcccgcaccaggtggtc
atcaccgacgtgagggccaacgtgctgtacgtcaaccgggccttcagcgaagtcagcggc
tacagcgcgcaggaaattctggggaagaacccccggatgctgcagtccggtctcacgccc
cgctccgtctacgaggagatgtggcgcaggctgccccagggccagccttggcagggcgaa
ctcgtcaaccggcgcaagaacggccatatctacaccgaaatcgtttccctctacccgatc
cgtgacctctccggccaggtgacgcattacgtcgcccacaaggaagacatcactgtgcag
cgcgaggccgaggagcgcatccaggccctgtcgaatttcgacacgctgaccggcctgctc
aacaagaagtccttcgacgagcggctggccctggccatcgagagggccggagcgagccac
gggcggctttccatgctgtggttcgacctggacaacttcaagctgatcaacgagtcgctc
ggccacacggccggagacgagctgctggtggaggcggccaaccgcctgcgctcctgcctg
gggacccagaacgcgctggcccgctattcgggggacgccttcgtggccatcgtgccgcag
gcagaccaggccagcgtcgcgctcatggcgcaggaggccctgcggcttctgcaaaccgcc
acatcggtgcagggccatcccgtgtcggtcagcgcatcggcgggcgtcgccgtgtatccc
gacgatgcccggacggccggcaccctggcctcggcggccgagctcgccatgtaccgcgtc
aaggaggacgggcgcaacggcctgcgcttcttcgcgcccgaaatgcaggcccacacgcag
cgctcgctggagctggcggcgggcctgaaggacgcggcgcgcaagggcgagctgttcctg
gtctaccagccccagcgcgcgctgggcagcggcgcgctggtcggcgccgaggcgctgctg
cgctggcgccacccgcagtgggggctggtgtcgccggcggagttcatccccatcgccgag
caaagcggcgccatcacggccatcgacttctgggtggtggaacaagccgcgcagcagctg
cgcgcgtgggacgccgccggccttccgccgctggtggtcgcggtgaacgtgtcggcggcg
cagtttgcccgcccccagctggccgaggaattgctgcacatcctgcagcgcgtggacgtg
tcgccgcagcgcatcgaggtggaactgacggaggccgtggcgctcaagcacccggagctg
gccgagaccaccatccggcgcctgcacgacatgggcttcaaggtggcgctggacgacttc
ggcaccggctattcgtccatgagctacctcaagcgctacaccatcgacaagctcaagatc
gaccagtccttcgtgcgcgagctggccgagaagaccagcgacatggccatcgtgacggcc
atcgtccgcatggcgcacagtctgcacctgtcgaccctcgccgagggcgtcgagacggcc
gagcaggccgccctgctgcacgactgcggctgcgacgaaatacagggctactggtacagc
aggcccctggagcctcgcgccttcgaagcattcgccaagggcctgccgcagcgcggcgcc
tga
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