Alicycliphilus denitrificans K601: Alide2_0952
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Entry
Alide2_0952 CDS
T01463
Name
(GenBank) UPF0042 nucleotide-binding protein yhbJ
KO
K06958
RNase adapter protein RapZ
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adk03019
]
Alide2_0952
Messenger RNA biogenesis [BR:
adk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Alide2_0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_28
AAA_18
AAA_16
AAA_22
AAA_33
AAA_29
ABC_tran
FtsK_SpoIIIE
CoaE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEB83363
UniProt:
F4G9E8
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All DBs
Position
complement(995994..996857)
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AA seq
287 aa
AA seq
DB search
MSLEVVVITGMSGSGKSVALHALEDAGYYCVDNLPPELLASFVALEHAHHGHRVAVAMDV
RSATALPLVPQQLDRLREQGVQVRSLFLDATTGTLVRRFSETRRRHPLSQDELIEGRRAL
VQTIELERELLAELRAQSHVIDTSTLRPSQLLSYVKDLLAVPPSQLTLVFQSFAFKRGLP
FDSDYVFDVRMLPNPHYEPALRPLTGKDAPVAEYLRQQPEVALMLSHITQFLEHWLDALA
QNHRSYVTVAVGCTGGQHRSVYLVEQLAERFTGRWNTLRRHRELDGI
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggaagtcgtcgtcatcaccggcatgtccggctcgggaaagtccgtggccctg
cacgcgctggaggacgcgggctactactgcgtggacaacctgccgccggagctgctggcc
tcgttcgtcgcgctggagcacgcgcaccacggccaccgcgtcgccgtggccatggacgtg
cgcagcgccaccgccctgccgctggtgccccagcagctcgaccgcctgcgcgagcagggc
gtgcaggtgcgctcgctgttcctggacgccaccaccggcacgctggtgcgacgcttttcc
gaaacgcgccggcgccacccgctgtcccaggacgagctgatcgagggccggcgcgcgctg
gtgcagaccattgagctggagcgcgagttgctggccgagctgcgcgcgcaatcccacgtc
atagacaccagcaccctgcgcccgtcgcaactgctgagctacgtgaaggacctgctggcc
gtcccgcccagccagctcactctggtgttccagtcgttcgccttcaagcgcgggctgccg
ttcgattcggactacgtcttcgacgtgcgcatgctgcccaacccgcactacgagcccgcg
ctgcgcccgctcaccggcaaggacgcgcccgtggccgaatacctgcgccagcagcccgag
gtggcgctgatgctctcgcacatcacgcagttcctggagcattggctcgatgccctggcg
caaaaccaccgcagctacgtcacggtggccgtaggctgcacgggcgggcagcaccgctcc
gtatacttggtggagcagctggccgagcgcttcaccggccgctggaacacgctgcgccgg
caccgcgagctcgacggcatttga
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