Alicycliphilus denitrificans K601: Alide2_1363
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Entry
Alide2_1363 CDS
T01463
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Alide2_1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adk03019
]
Alide2_1363
Enzymes [BR:
adk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Alide2_1363
Messenger RNA biogenesis [BR:
adk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Alide2_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEB83765
UniProt:
F4GDU8
LinkDB
All DBs
Position
1429394..1430836
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AA seq
480 aa
AA seq
DB search
MTQPYSTLALAEPLKRAVADMGYENMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLP
LLQRLLKHENSSASPARHPVRALVLLPTRELADQVAQQIAMYAKYTKLRSTVVFGGMDMK
PQTAELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKQRTTLLFSATFSPEIKRLAGSYLQDPVTIEVARPNETASTVEQRFFSVQDDDKRRAI
RHVLTERGLKQAFIFVNSKLGCARLARSLERDGLKTAALHGDKSQDERLKALEAFKSGDV
DLLVCTDVAARGLDIKDVPAVFNHDVPFNAEDYVHRIGRTGRAGASGLAVTLVGSGDARL
VADIEKLIKKKVELEPLELQEERPRGRFNDGRRAWREEGGDAPRSGGRERGGYRGAPAVV
RDAFFDKPYEPSATGSGAASWEVAPKAAVARGSISANIKHKRKLPALFKAPQPEAEPSAQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaccctactccacccttgcgctggccgaaccgctcaagcgcgccgtagccgat
atgggctacgagaacatgaccccgatccaggcccaggcgatccccgtggtgctgacgggc
aaggacgtgatgggcgccgcgcagaccggcaccggcaagacggctgcgttctcgcttccg
ctgctgcaacgcctgctcaagcacgagaacagctccgcctcgcccgcgcgccaccccgtg
cgcgccctggtgctgctgcccacgcgcgagctggcggaccaggtggcgcagcagatcgcc
atgtacgccaagtacaccaagctgcgcagcaccgtggtgttcggcggcatggacatgaag
ccgcagaccgccgagctcaagaagggcgtcgaggtgctggtggccacgccggggcggctg
ctcgaccacatcgaggccaagaacgcggtgctcaaccaggtcgagtacgtggtgctcgac
gaggccgaccgcatgctggacatcggcttcctgcccgacctgcagcgcatcctttcgtac
ctgcccaagcagcgcaccacgctgctgttttcggccacgttctcgcccgagatcaagcgc
ctggcgggcagctacctgcaggatcccgtcaccatcgaggtggcgcgccccaacgagacg
gcctccaccgtggagcagcgcttcttcagcgtgcaggacgacgacaagcgccgcgccatc
cgccacgtgctgaccgagcgcgggctcaagcaggccttcatcttcgtcaacagcaagctc
ggctgcgcccgcctggcgcgcagcctggagcgcgacggcctgaagaccgcggcgctgcac
ggcgacaagagccaggacgagcgcctcaaggccctggaggccttcaagagcggcgacgtg
gacctgctggtgtgcaccgacgtggcggcgcggggcctggacatcaaggacgtgccggcc
gtgttcaaccacgacgtgccgttcaacgccgaggactacgtgcaccgcatcggccgcacg
gggcgcgcgggcgcatcgggcctggccgtcacgctggtcggcagcggcgatgcgcgcctg
gtggccgacatcgagaagctcatcaagaagaaggtcgagctcgaaccgctggaactgcag
gaagagcgcccgcgcgggcgcttcaacgatggccggcgcgcctggcgcgaggagggcggc
gacgccccccgcagcggcggccgcgagcgcggcggctaccgcggcgcaccggccgtggtg
cgcgacgccttcttcgacaagccctacgagcccagcgccaccggcagcggtgcggcgagc
tgggaggtggcccccaaggcggccgtggcgcgcggcagcatctccgccaacatcaagcac
aagcgcaagctgccggccctgttcaaggcgccccagcccgaggccgagccttcggcccag
tga
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