KEGG   Alicycliphilus denitrificans K601: Alide2_1563
Entry
Alide2_1563       CDS       T01463                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
adk  Alicycliphilus denitrificans K601
Pathway
adk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:adk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Alide2_1563
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:adk02044]
    Alide2_1563
Secretion system [BR:adk02044]
 Type IV secretion system
  Trb secretion system protein
   Alide2_1563
SSDB
Motif
Pfam: TrbI AMT4_dom_C
Other DBs
NCBI-ProteinID: AEB83955
UniProt: F4GG85
LinkDB
Position
complement(1657600..1658886)
AA seq 428 aa
MSQDNTPDLATPQAGKVAPEAVALRAQPRPVTRLNRRTLAILVGGLSVAVLGATIWSLQP
QRRGTGEQTELYNVDRVSKSEGLDALPTDYSKLPPALPPDVPELGPPLPGDLGPAIVASQ
QPVTPGYSPPGHDPEDALRKEADAAAASSVFFRSGAQGQAATTVAQAAPGAPGVANTLAA
FAPLAAGPASTAAQPADPTTVQNRQDQKEAFLKAGSTETRNSGNLALPASPYQVMAGTVI
AGALVTGIKSDLPGDVIATVTEPVYDTATGRHLLIPQGARILGRYNSQVSYGQSRVQVVW
NRIILPDTSSLTLDNLAGTDPAGYAGLEDGVDWHWDRIFAGAALTTLLGVGAELASPGNR
QNGDRVIIAGRDSLQDSVNQVGQEMTRRNLNIQPTLTERPGLPVRIIVNRDLVLRPYQPL
FFNRGSSR
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgagccaggacaacacccccgacctcgccacgccgcaggcgggcaaggtcgcgcccgag
gcggtggcgctgcgcgcccagccgcgcccggtcacgcgcctgaaccggcgcacgctggcc
atcctcgtcggcggcctgtcggtcgccgtgcttggggccacgatctggtcgctgcaaccg
cagcggcgcggtacgggcgagcaaaccgagctttacaacgtcgatcgcgtctcgaagtcc
gaaggactggatgcgctgccgacggattactcgaagctgccaccagccttgccgcccgat
gtgcccgagctggggccgccgttgcccggcgaccttggcccggccatcgtcgcttcgcag
cagccggtgacgccgggctattcgccgccaggccatgatcccgaagatgccttgcgcaag
gaggcggacgcggcggcggcctcgtcggtgttcttccgctcgggcgcccagggccaggcc
gccaccacggtcgcgcaagctgcgccgggtgcgcctggtgttgcaaacacactcgcggcc
ttcgctcctctcgctgccgggcctgcctcgacggcggcccagcccgccgacccgacgacc
gtgcagaaccggcaagaccagaaagaagcgttcctgaaagccggttctacggaaacccgc
aactccggcaacctggcgctgccggcgtctccgtatcaggtgatggccggaaccgtgatc
gcgggcgcgctggtgacgggcatcaagtcggacttgccgggcgacgtgatcgctacggtg
acggagcctgtctacgacacggctacgggccggcatctgctgattccacagggggcgcgc
atcctcgggcgctacaacagccaggtcagctacggccagagccgggtgcaggtggtgtgg
aaccggatcattctgccggacacgtcctcgttgacgctggacaacctggccggcaccgac
ccggccggctatgccggcctggaggatggtgtcgattggcattgggatcgcatcttcgcc
ggcgccgccctgacgacgctgctgggcgtcggtgccgagttggcctcgccggggaaccgc
cagaacggcgaccgcgtcatcatcgccggacgcgacagcttgcaggacagcgtgaaccag
gtcggacaggaaatgacccggcgcaacctcaacatccagccgacgctgaccgaacggccg
ggtttgccggtgcggatcatcgtcaaccgcgacctggttctccgcccctatcagccgctg
ttcttcaaccgggggagttcgagatga

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