Alicycliphilus denitrificans K601: Alide2_1880
Help
Entry
Alide2_1880 CDS
T01463
Name
(GenBank) Integrase catalytic region
Organism
adk
Alicycliphilus denitrificans K601
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
Sigma70_r4_2
HTH_23
HTH_24
HTH_29
MerR
HTH_IclR
HTH_11
HTH_17
HTH_7
HTH_38
HTH_3
MerR_1
HTH_28
Phage_NinH
HTH_31
HTH_Tnp_ISL3
NUMOD1
HTH_AsnC-type
Sigma70_r4
HTH_36
HTH_40
HTH_19
HTH_30
HTH_Tnp_Tc3_1
HTH_Tnp_1
HTH_psq
HTH_26
GntR
HTH_Mga
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
AEB84259
UniProt:
F4G6F0
LinkDB
All DBs
Position
complement(1987016..1988542)
Genome browser
AA seq
508 aa
AA seq
DB search
MIDVATLSVIRRWALREQLSIREIARRTGLSRNTIRKYLRVGEAEPHYAKRVSPSKLDPF
ALKLAGWLKTEAGRSRKQRRTVKQMYVDLQALGYGGSYNRVAAFARLWHEQRLVAQQTTG
RGTFVPLAFGPGEAFQFDWSEDWAVLAGVRTKLQVAHFKLSHSRAFYLRAYPLQTHEMLF
DAHNHAFAVLGGVPRRGIYDNMRTAVDRVRRGKERDVNARFAAMVSHFLFEAEFCNPASG
WEKGQVEKNVRDARHRLWQVVPPFLSLSDLNAWLEERCVALWHEIEHGKLPGTVADVWAQ
EKATLMPMPRPFDGFVEHTKRVSPTCLVHFERNRYSVPAPYANRPVSLRVYADRLVVAAE
GQIVCEHQRLIERNHHGAGQTVYDWRHYLAVLQRKPGALRNGAPFLELPAAFKRLQAALL
KQPGGDREMVEVLALVLHHDEQAVLAAVELALESGAASKTHILNVLHRLLDGKPAPAPVT
SPQALKLSVEPQANVLRYDQLREVRYAS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacgtggcaacactgagtgtcatcaggcgctgggccctgcgagagcagctgtcc
atccgggagatagcccgccgcacgggcctctcgcgcaacaccatccgcaagtacctgcgc
gtaggcgaggccgagccgcactatgccaagcgggtcagtccatccaagctcgatcccttc
gccttgaagctcgctggctggctcaagacggaagctggccgatcccgcaagcagcgccgc
accgtcaagcagatgtacgtggatctgcaggcgctcggttatggcggctcctacaaccgc
gtagcggcctttgcccgcctctggcacgagcagcgccttgtggcccagcagaccactggc
cgcggcaccttcgttcccctggccttcggtccgggtgaggccttccagttcgactggagc
gaggactgggctgttctcgccggcgtgcgcaccaagctgcaggtagcccacttcaagctc
agccacagccgagcgttctacctgcgcgcctatccgctgcaaacgcacgagatgctgttc
gatgcccacaaccatgcattcgcagtcctgggcggtgtgccccgccgtggcatctacgac
aacatgcgcaccgccgtagaccgggtgcgccgtggcaaggagcgcgacgtcaatgcgcgc
tttgcggccatggtcagccacttcctgttcgaggccgagttctgcaatcctgcttcgggc
tgggagaagggccaggtggagaagaacgtgcgcgatgcccgccatcgcctgtggcaggtg
gtgccgccattcctaagcctgtccgatctcaatgcctggcttgaagagcgctgcgtggcg
ctgtggcacgagatcgagcacggcaagctgccgggcaccgtcgcggatgtctgggctcaa
gagaaggcaaccttgatgccgatgccccggcccttcgatggctttgtggagcacaccaag
cgcgtctcacccacctgcttggtccacttcgagcgcaatcgctacagcgtgccggcgccg
tatgccaatcgaccggtgagcctgcgggtctatgccgatcgcctggtggtcgctgccgaa
ggccagatcgtgtgcgagcatcagcgcctgatcgagcgtaaccaccatggtgcgggacag
accgtgtacgactggcgccactacctggcagtgctgcagcgcaagcccggggccttgcgc
aatggtgctccattcctggaactgccagcagccttcaagcgcctgcaggccgccctcttg
aagcagccaggcggcgaccgagagatggtggaggttctggctctggtgctgcaccacgat
gaacaagctgtgctcgctgcagtggagttggcactggagtcaggggctgccagcaagacc
cacatcctgaacgtgctgcaccgcctgctggacggtaagcccgccccagcaccggtcacc
tcgccccaggccctcaagctgtctgtggaaccccaggccaacgtgctgcgctatgaccaa
ttgagggaggtgcgctatgcgtcatga
DBGET
integrated database retrieval system
