Alicycliphilus denitrificans K601: Alide2_2008
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Entry
Alide2_2008 CDS
T01463
Name
(GenBank) phage/plasmid primase, P4 family
KO
K06919
putative DNA primase/helicase
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Alide2_2008
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Gene cluster
GFIT
Motif
Pfam:
D5_N
DUF5906
Toprim
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEB84383
UniProt:
F4G806
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Position
2103438..2105738
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AA seq
766 aa
AA seq
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MTLDFNDIAPLPDPTRRSLGDAEREELRAELLARLESVLITLFPAGKKRRGKFLIGDVLG
SPGDSLEVVLDGEKAGLWTDRATGDGGDIYALIAAHLGIDVPGDFPRVLDAAADLIGRSR
SAPVRKANKKDVPVDELGPATAKWDYLDAQGHLIAVVYRYDPPGQKKQFRPWDAKRRKMA
PPDPRPLYNQSGMTSTAQVVLVEGEKCAQALIDAGIVATTAMHGANAPVEKTDWSPLSGK
AVLIWPDRDKPGWEYATQAAQAILSAGAKSCHVLYPPEEAAEGWDVADAIAEGFDVATFL
THGPRLQMHDVADDVDPVVSSDESVWGTEDALALSFTRRYHRDWRYVAGWGKWLVWDGQR
WRTEDTLAATDLIRSVCRQTAVRADNPKVAAKLASAGTVGGVERLARADRRHAATTDEWD
ADPWLLNTPGGVVDLKTGRMRTHERADRMTKITTATPSGDCPTWRQFIDEVTGGDQELQS
YLQRMVGYALTGSTQEHALFFLYGTGANGKSVFVNTLATILRDYATNAPMDTFMETRTDR
HPTDMAGLRGARFVAAIETEQGKRWAESKLKNLTGGDKISARFMRQDFFEFFPQFKLFVA
GNHKPAIRNIDEAMKRRLHLIPFTITVPPERRDKNLQQKLLAERDGILAWAVQGCLDWQR
HGRLSPPQRVVDATEEYFEAEDALGRWLDERCVREPNAKSLTAELFNDWKQWAEASGEFV
GAQRRFSDLLITRGLDKWRNGMGVRGFQGIGLKHPPTPAYTPYADN
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcgacttcaacgacatcgcgccactgcccgaccccacccgccgcagcctcggc
gatgccgaacgcgaagaactgcgtgccgaactgctcgcgcgtcttgaatccgttctgatc
accttgttcccggcgggcaagaagcgccgtggcaagttcctgatcggcgacgtgctgggt
agtccaggcgacagcctcgaggtggtgctcgatggcgagaaggctggactgtggacagat
cgcgccaccggcgacggtggcgacatctatgcactgattgcggcgcacctcggcatcgac
gtgccgggcgacttcccgcgcgtgctcgacgccgccgccgatctgatcggacgctcgcgt
tccgcaccagtacgcaaggccaacaagaaggacgtgccggtcgacgaactcggccccgcc
accgcgaagtgggactatctcgacgcccaaggccatctcatcgccgtcgtctaccgctac
gacccgcccggacagaagaagcagttccggccctgggatgcgaagcggcgcaagatggca
ccgcccgacccgcgtccgctctacaaccagtcaggaatgaccagtaccgcgcaggtggtg
ctggtcgaaggcgagaagtgcgcgcaggccctgatcgacgcgggcatcgtggccaccacg
gcgatgcacggcgcgaacgctccggttgaaaagaccgactggtcgccgctgtctggaaag
gccgtgctgatctggcccgaccgcgacaagccgggctgggagtacgccacgcaggcggca
caggccatcttgtcggcgggggccaaatcctgccacgtcctctatccgcccgaagaggct
gcagagggctgggacgtggccgatgccatcgccgagggctttgatgtcgccaccttcctc
acccacgggccgcgccttcagatgcacgacgtggccgatgacgttgatccagtcgtcagc
agcgacgagtccgtctggggtacggaggacgcgctggcgctgtccttcacgcgccgctac
caccgcgactggcgctacgtggctggctggggcaagtggctggtgtgggacgggcaacgc
tggcgcaccgaggacacgctggcggccacggacttgatccgcagcgtctgccgccagacg
gctgtgcgcgccgacaaccccaaggtcgccgccaaattggccagcgcaggaacggtcggc
ggtgtggagcgcctggcgcgcgctgatcgcaggcacgcggccaccaccgacgaatgggat
gcagatccgtggcttctcaacacgccgggcggtgtggtcgatctcaagacaggccggatg
cgcacgcacgagcgcgccgaccggatgaccaagatcaccacagccacgcccagtggcgac
tgcccgacctggaggcagttcatcgatgaggtcacgggtggcgaccaggaacttcagtcc
tacctgcaacggatggtcggttacgcgctgaccgggtcgacgcaagagcacgcgctgttt
ttcctgtacggcacaggcgcgaacggcaagtcggtgttcgtcaacacgctggccaccatc
ctgcgtgattacgcgaccaacgcgccgatggacacgttcatggaaacgcgcaccgaccgg
cacccgaccgatatggcgggactgcgcggcgcgcgcttcgtggcggccatcgaaactgaa
cagggcaaacgctgggccgagtccaagctcaagaacctcaccggtggcgacaagatctcg
gcgcgcttcatgcgccaggacttcttcgagttcttcccgcagttcaagttgttcgtggcg
ggcaaccacaagcccgccattcgcaatatcgacgaggcgatgaaacgcaggctgcacctg
atccctttcacgatcaccgtgccgcccgagcgccgcgacaagaacctgcaacagaagctc
ttggccgaacgtgacggcatcctcgcgtgggccgtgcagggctgtctcgactggcagcgc
cacggacgactctctccaccgcagcgcgtggtggacgccaccgaggaatatttcgaagcc
gaggacgccttgggtcgctggctcgatgagcgctgcgtgcgcgagcccaacgccaagtca
ttgaccgccgagttgttcaacgactggaagcagtgggctgaagcctctggcgagtttgtc
ggcgcacaacgccgcttttccgatctgctcatcacgcgtgggttggacaaatggcgcaac
gggatgggcgtgcgcgggtttcagggtattggcctcaagcatccgccgacccctgcctac
accccctacgcggacaactga
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