Alicycliphilus denitrificans K601: Alide2_2383
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Entry
Alide2_2383 CDS
T01463
Name
(GenBank) 2',5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adk03016
]
Alide2_2383
Enzymes [BR:
adk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Alide2_2383
Transfer RNA biogenesis [BR:
adk03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Alide2_2383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
DUF2786
Motif
Other DBs
NCBI-ProteinID:
AEB84747
UniProt:
F4GC88
LinkDB
All DBs
Position
2484337..2484960
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AA seq
207 aa
AA seq
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MQAPQQSPAGVEPAAPLLQHHLFFAVLPDAAAAHAAADLAQSLIARHDLQAQVRAQRLHA
TLLSLGWEAALSERHLAWARAAAARVRAPSFQLRFDRVLSFARAPRAKRPCVLCGPADGH
PGFLHLYEALHAQLWSQVPGLQGVPQAPRITPHMTLCYSRQAVPEQAVPPLAWTVDRFVL
LHNVRGSSGPYEVLGEWPLGPTTLFET
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaccgcaacagtcgcccgcaggcgtggagcctgcggcgcccctccttcagcac
catctgttcttcgccgtgctgcccgacgccgcggcggcgcacgcggcggccgatctggcg
cagtcgctcatcgcgcgccacgacctgcaggcgcaggtgcgggcgcagcgcctgcacgcc
actctgctgtcgctgggctgggaggccgcactgtccgagcgccacctggcatgggcgcgc
gccgcggcggcgcgggtgcgggcgccgtcgttccagctgcgcttcgaccgcgtgctgagc
tttgcgcgtgcgccgcgggccaagcgcccctgcgtgctgtgcgggcctgccgatgggcac
ccgggcttcctgcacctgtacgaggcgctgcacgcgcagctgtggtcccaggtgccgggg
ctgcagggcgtgccgcaggcgccgcgcatcacgccgcacatgacgctgtgctacagccgc
caggccgtgcccgagcaggccgtgccgcccctggcctggacggtggaccgcttcgtgctg
ctgcacaacgtacgcggatcgagtgggccttacgaggtgctgggcgagtggcccctgggc
ccgacgacgctatttgaaacatag
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