Alicycliphilus denitrificans K601: Alide2_2389
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Entry
Alide2_2389 CDS
T01463
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase rumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adk03009
]
Alide2_2389
Enzymes [BR:
adk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Alide2_2389
Ribosome biogenesis [BR:
adk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Alide2_2389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
MTS
Methyltransf_23
Methyltransf_11
TPMT
bHLH_NPAS4
Methyltransf_12
TRAM
Motif
Other DBs
NCBI-ProteinID:
AEB84753
UniProt:
F4GC94
LinkDB
All DBs
Position
2487596..2489047
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AA seq
483 aa
AA seq
DB search
MSDPTATHLPPEPQHPLPPGWLEVTSMDMDAQGVARKSDGKVVFIDGALPTELVSANTHR
KKNNWEQASLTEIHRESSLRVRPGCPHFGLHAGACGGCKMQHLDAGAQVAMKQRVLEDNL
WHLAKVKAETILRPIEGPAWGYRYRARLSVRYVPKKGTVLVGFHERKSRYIADMQTCKIL
PPHVDAMLMPLRALIAGMQARDTCPQIELACGDAVTALVLRHLEPLSDADKDRLRAFAAE
HGVQWWLQPKGPDTVHLLDEGGEQLAYGLPDFGITMPFKPTDFTQVNPHINRVLVTRALR
LLDAREDERVIDWFCGLGNFTLPIATRSREVLGVEGSEALVARSRENYQKNQAQRQAGKA
LAATNFVARNLFEMTPEVLIADGAADKWLVDPPREGAFALSKALADIHQARLGAAEAPPL
PAGHERWQPPRRIVYVSCNPATLARDAGLLVHQAGYRCAAAGVVNMFPHTAHVESMAVFE
RAA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccccactgcaacccatctaccacccgaaccccagcaccctctgccgcccggc
tggctcgaagtcacgtccatggacatggacgcccagggcgtggcgcgcaagagcgacggc
aaggtcgtgttcatcgacggcgccctgcccaccgaactggtcagcgccaacacccatcgc
aagaagaacaactgggagcaggccagcctcaccgagatccaccgcgaatccagcctgcgc
gtgcggcccggctgcccgcacttcggcctgcacgcgggcgcctgcggcggctgcaagatg
cagcacctggatgccggcgcgcaggtggccatgaagcagcgcgtgctggaggacaacctc
tggcacctggccaaggtgaaggccgagaccatcctgcgccccatcgaggggccggcctgg
ggctaccgctaccgcgcgcgcctgtcggtgcgctacgtgcccaagaagggcacggtgctg
gtgggctttcacgagcgcaagagccgctacatcgccgacatgcagacctgcaagatcctg
ccgccgcacgtggacgccatgctcatgccgctgcgcgccctgatcgccggcatgcaggcg
cgcgacacctgcccgcagatcgagctggcctgcggcgacgcggtcacggccctggtgctg
cgccacctggagccgctgtcggacgccgacaaggacaggctgcgcgccttcgcggccgag
catggcgtgcaatggtggctgcagcccaaggggccggacaccgtgcacctgctcgacgag
ggcggcgagcagctcgcctacgggctgccggacttcggcatcaccatgcccttcaagccc
acggacttcacccaggtcaacccgcacatcaaccgcgtgctggtcacgcgcgcgctgcgt
ctgctggatgcgcgcgaggacgagcgcgtgatcgactggttctgcggcctgggcaacttc
acgctgcccatcgccacccgctcgcgcgaggtgctgggcgtggagggcagcgaggctctg
gtcgcccgctcgcgcgagaattatcagaagaatcaggcccaaaggcaggctggtaaagcg
ctggcagctaccaattttgttgcgcgcaacctgttcgagatgacgcccgaggtgctgatc
gccgacggcgcggccgacaaatggctggtcgatccgccgcgcgagggcgcattcgccctg
tccaaggcgctggccgacatccaccaggcgcgcctgggcgccgcggaggcgccgccgctg
cccgcggggcacgagcgctggcagccgccccggcgcatcgtctacgtgagctgcaacccc
gccacgctggcgcgcgacgcgggcctgctggtgcaccaggcgggctaccgctgcgcggcg
gcgggcgtggtcaacatgttcccgcacacggcccatgtggagagcatggcggtgttcgag
cgggcggcttga
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