KEGG   Alicycliphilus denitrificans K601: Alide2_2655
Entry
Alide2_2655       CDS       T01463                                 
Name
(GenBank) exonuclease-like protein
  KO
K16899  ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
Organism
adk  Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:adk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adk03400]
    Alide2_2655
Enzymes [BR:adk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Alide2_2655
DNA repair and recombination proteins [BR:adk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Alide2_2655
SSDB
Motif
Pfam: PDDEXK_1
Other DBs
NCBI-ProteinID: AEB85012
UniProt: F4GEX6
LinkDB
Position
complement(2779023..2781590)
AA seq 855 aa
MTVIAKSDARAAAPMWRSALQAVQEHVRCRGVHPARAVVLVPYAQLMAEAQRQWTRWQGD
GFAPRFETTRNWARQLAGFVPQGLDFAHDVARDRFTGAALLERAGLAAQREMLLAPLLEA
AGQLAPVAAAVAPGRRAEWLERQRGVLGLAGEGSALRYEAAVARVALEWVAASRHATDVL
FEPGVRTAVDALVLLQGFQPDALAQALCAAWGDSALALPLWQAPTGQGRIRLRRALDAED
EAQRAAACAIAHVQAGRVPVALAGTDRALVRRITALLQGAGLAARDENGWTLSTTRAAAQ
VMAALRACAWDAGSDAVLDWLKAVPVIEEPALRALEQWLRRNAVRRWSGAPGRAQGRPAI
AATIAQVEALRAPMRAARPLAEWLRGLRQLLQASGQWDALQQDDAGERVLLELHLAEGLE
GSLADAEGAGRRLSPGDFGHWADQVLEATRFKPDWEQDAAADLVVLPLPQLLARPFAALV
LAGCDEKRLQAAPEPPGPWTQAQRQALGLPTREALEAAQRAAWADALQIPWVDVLWRASE
GGEPLLASPLVLALPPALHAQAPQDTRLPRAVAPGATPRPWPVGARLPVAQLSASAYADL
RHCPYRFYALRQLGLQEQDELEAELDKRDFGTWLHAVLQRFHEGLRDAPTRDAAERSARL
DAAASQAREQLGLAGSDFLPYASGWPQLCDGYLRWLDEHEAAGARFARAEVEAQRHLALK
GGSLELVGKLDRIDEAKDAEGRAGTLVIDYKTEGSQTTRARVQAGTEDTQLAFYAALMPE
GRGPLRAAYVNVGERGETRTFEAPDVEQLRDALLAGIRDDFDRIAQGAGLPALGEGSVCD
WCAARGLCRKDFWNE
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgacagtcatagcgaaaagcgatgcccgcgccgccgcgcccatgtggcgcagcgccctg
caggcagtgcaggagcacgtccgttgccgcggcgtgcacccggcgcgcgccgtggtgctc
gtgccctatgcccagctcatggccgaggcgcagcgccagtggacgcgctggcagggcgac
ggcttcgcgccgcgcttcgagaccacgcgcaactgggcgcggcagctggcgggcttcgtg
ccccagggcctggacttcgcgcacgacgtggcgcgcgaccgcttcaccggcgccgcgctg
ctggagcgcgcgggcctcgccgcgcagcgcgagatgctgctcgccccgctgctggaggcg
gccggccagctcgcccccgtggccgccgccgtggcgccggggaggcgcgccgagtggctt
gagcgccagcgcggcgtgctgggcctggcgggcgagggcagcgccctgcgctacgaggcc
gccgtggcgcgcgtggcgctggaatgggtggccgcctcgcgccatgcgaccgacgtgctg
ttcgagcccggcgtgcgcaccgccgtggatgcgctggtgctgctgcagggctttcagccc
gacgcgctggcccaggccttgtgcgcggcctggggcgacagtgccctggccctgccgctg
tggcaggcgcccacgggccaggggcggatccgcctgcgccgcgcgctggacgccgaggac
gaggcccagcgcgccgccgcctgcgccattgcccacgtgcaggccggccgcgtgcccgtg
gccctggccggcaccgaccgcgcgctggtgcggcgcatcaccgcgctgctacagggcgcg
gggctcgcggccagggacgagaacggctggaccctgtccaccacccgcgccgccgcccag
gttatggcggcgctgcgcgcctgcgcctgggacgcgggtagcgatgcggtactcgactgg
ctcaaggccgtgcccgtgatcgaggaaccggccctgcgcgccctggagcaatggctgcgc
cgcaacgccgtgcgccgttggagcggcgccccgggccgcgcccagggccggcccgccatt
gccgccaccatcgcgcaggttgaagccctgcgcgcgccgatgcgcgccgcgcgccccctg
gccgagtggctgcgcggcctgcgccagcttttgcaggccagcggccagtgggatgcattg
cagcaggacgacgcgggcgagcgcgtgctgctggaactgcacctggccgagggcctggag
ggcagcctggcggatgccgaaggggcggggcgcaggctctcgccgggcgacttcggccac
tgggccgaccaggtgctcgaagccacccgcttcaagcccgactgggagcaggacgcggcc
gccgacctcgtggtgctgcccctgccgcagctgctggcccgccccttcgccgcgctggtg
ctggccggctgcgacgaaaagcgcctgcaggccgccccagagcctcccgggccatggacc
caggcccagcgccaggccctgggcctgcccacgcgcgaggcgctggaggccgcccagcgc
gccgcctgggccgacgccctgcagattccctgggtagacgtgctgtggcgcgccagcgag
ggcggcgagccgctgctggccagccccctggtgctggcgctgccgcccgccctgcatgcg
caggcgccgcaggacacccgcctgccgcgcgccgttgcgcccggcgccacgccgcgcccc
tggcccgtgggcgcgcgcctgcccgtggcgcagctgtcggcatcagcttatgccgacctg
cgtcactgcccctatcgcttctatgcgctgcgccagctcggcctgcaggagcaggacgag
ctggaggccgagctggacaagcgcgacttcggcacctggctgcacgcggtgctgcagcgt
ttccacgaaggcctgcgcgacgcgcccacgcgggacgcggccgagcgcagcgcgcgcctg
gacgccgcggccagccaggcgcgcgagcagctgggcctggccggcagcgactttctgccc
tatgcgagcggctggccgcagctgtgcgacggctacctgcgctggctggacgagcacgag
gccgcaggcgcgcgattcgcccgggccgaggtcgaggcacagcggcacctggcgctgaaa
ggaggcagcctggagctggtgggcaagctcgaccgcatcgacgaggccaaagacgcagaa
ggccgcgccggcaccttggtcatcgactacaagaccgaaggcagccagaccaccagggcg
cgcgtgcaggcgggcaccgaagacacccagctcgccttctacgccgccctcatgcccgaa
gggcgcggccccctgcgcgccgcctacgtgaacgtgggcgagcgcggcgagaccaggacc
ttcgaggcgcccgacgtggagcagctgcgcgacgcgctgctggccggcatacgcgacgac
ttcgaccgcatcgcgcagggcgcgggcctgcccgcgctgggcgagggcagcgtgtgcgac
tggtgcgccgcgcgcggcctgtgccgcaaggatttctggaatgaatag

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