Alicycliphilus denitrificans K601: Alide2_2988
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Entry
Alide2_2988 CDS
T01463
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adk03400
]
Alide2_2988
Enzymes [BR:
adk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Alide2_2988
DNA repair and recombination proteins [BR:
adk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Alide2_2988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AEB85335
UniProt:
F4G5S8
LinkDB
All DBs
Position
complement(3118633..3120171)
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AA seq
512 aa
AA seq
DB search
MKAAHTLRLVLGDQLHPGHSWFAQVDAQVVYVLMEVRQETDYVLHHAQKILAIFAAMRDF
ARYLRAGGHRVRYVALDDPSNRQSIPGNLAALAAHYAAQCIEWQQPDEWRLDAQLQTWGA
AQPLKWAVVNSEHFLTERGELAALMGQRKQWLMEHFYRHMRRRCKLLLDADGAPEGGKWN
FDHDNRKRWPGTPPEPADWRPRHDHSDLWRMVQRAGVQSFGDPQAAALRWPLNRSEALAC
LDAFIDTALPHFGDYEDALAAQAPRLFHSLLSFALNVKMLQPLEVVQRAEAAWRAGQAPL
AAVEGFVRQIVGWREYVRGIYWAHMPGYASHNALAQHTSLPRWFWSGDTHMRCLHLAITQ
SLQTAHAHHIQRLMVIGNFALLAGLEPQALHRWYLGIYIDAFEWVELPNTLGMSQRADGG
VIATKPYVSSAAYLQRMGDYCQGCAYDPKQKTGARACPFNALYWDFFERHAPMLQGNPRL
ALVYRQLKKMPDVEREALRTQAGHLRERLDTL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgcccacaccctgcgcctggtgctgggcgatcagctgcaccccggccacagc
tggtttgcccaggtggacgcgcaggtggtctatgtgctgatggaggtgcgccaggaaacc
gactatgtgctgcaccacgcgcagaaaatcctcgccatcttcgccgccatgcgcgacttt
gcgcgctacttgcgcgccggcggccaccgcgttcgctacgtcgcattggatgaccccagc
aaccgccagtccatccctggcaacctggcggcgctggccgcgcactacgccgcccaatgc
atcgagtggcagcagcccgacgaatggcggctggacgcccagctgcagacctggggcgcc
gcccagccgctgaaatgggcggtggtgaacagcgagcattttttgaccgaacgtggcgag
ctcgccgcgctgatgggccagcgcaagcagtggctgatggaacatttctaccgccacatg
cgccgccgctgcaagctgctgctggacgccgatggcgcccccgaaggcgggaagtggaac
tttgaccacgacaaccgcaaacgctggcccggcaccccgcccgagccggccgactggcgc
ccccgtcacgaccacagcgacttgtggcgcatggtgcagcgcgccggggtgcagagtttt
ggcgacccgcaagcggccgccctgcgctggccgctgaaccgcagcgaagccctggcctgc
ctggatgcattcatcgacacggcgctgccgcactttggcgactacgaggatgcactggcg
gcgcaggcgccgcgcctgttccattcgctgctgtcgtttgcactcaatgtgaagatgctg
cagccgctggaggtagtgcagcgcgccgaggccgcctggcgcgcgggccaggcgccgctg
gccgcggtggaagggtttgtacgccagatcgtcggctggcgcgaatacgtgcgcggcatt
tactgggcgcacatgcccggctatgcgtcgcacaacgccctcgctcagcacacctcgctg
ccgcgctggttctggagcggtgacacgcacatgcgctgcctgcatctggccatcacgcag
tcgctgcaaacggcgcacgcgcaccatatccagcggctgatggtgatcggcaatttcgcg
ctgcttgccgggttggagccgcaggcgctgcaccgttggtatctaggtatctacatcgac
gctttcgaatgggtggagctgcccaacaccctgggcatgagccagcgcgccgacggcggc
gtgattgccaccaagccctatgtgagcagcgccgcctatctgcagcgcatgggcgactac
tgccagggctgcgcctacgacccaaagcaaaaaaccggcgcgcgcgcctgccccttcaac
gccctgtactgggatttttttgagcgccacgccccgatgctgcaaggcaacccgcgcctg
gcgctggtgtaccgccagctgaaaaaaatgcccgacgtcgagcgtgaggccctgcgaacg
caagccgggcatctgcgcgaacggctggacacgctctga
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