Alicycliphilus denitrificans K601: Alide2_3002
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Entry
Alide2_3002 CDS
T01463
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adk03400
]
Alide2_3002
Enzymes [BR:
adk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Alide2_3002
DNA repair and recombination proteins [BR:
adk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Alide2_3002
Prokaryotic type
Alide2_3002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEB85349
UniProt:
F4G5U2
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All DBs
Position
3132562..3134025
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AA seq
487 aa
AA seq
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MASTALVWLRRDLRCDDHAALYHALRRYPRVYCAFVFDTGILDELPSRQDRRVEFIHASL
LELHQGLQQLAARSGAPGGGLIVRHGPALECIVQLAQELGVQEVLANRDYEPQAIARDQS
VAQALHALGIAFSDYKDQVLLDRDEVLTQQGRPYSVFTPYKRAWLQRLDDFQLKPYPVDR
YAHHLAPPPADERLPTLSDLSFGPTNLRELPLPSGMSGAQRLLQDFVPRMAAYQEARDYP
GRKGVSYLSVHLRFGTVSIRQLAALAAKQAAEGCGGAQTWLSELAWRDFYFMILWHHPQV
VTQSFKPEYDRVQWDEAPELWQAWCEARTGYPLVDAAMHQLLQTGYMHNRLRMVVASFLT
KDLGIDWRRGERFFAQHLNDYDLAANNGGWQWAASTGCDAQPYFRIFNPITQSQRFDPDG
TFIRRYLPELVGVPDAHIHFPAAMKPAALAACGLRLGVDYPVPVVDHARARQRTLMRFSL
LPESEIS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaactgccctggtctggctgcgccgcgacctgcgctgcgacgaccatgccgcg
ctgtaccacgcgctgcgccgctatccacgggtgtactgcgcctttgtcttcgacaccggc
atcctggacgaactgcccagccgccaggatcggcgcgtggagttcatccacgccagcctg
ctggagctgcaccagggcctgcagcagctggccgcgcgcagcggcgcccccggcggcggg
ctgatcgtgcgccatggcccggcgctggaatgcatcgtgcaactggcccaggagctggga
gtgcaggaggtgctggccaaccgcgactacgagccccaggccattgcacgcgaccagagc
gtggcccaggccttgcacgcgctgggcatcgccttcagtgactacaaggatcaggtgctg
ctggaccgtgacgaagtgctgacccagcagggccggccctacagcgtgttcacgccctac
aagcgcgcatggctacaacggctggacgatttccagctcaaaccctaccccgtcgatcgc
tacgcccaccacctggcgccgccgcctgcggatgaacgcctgcccacgctgtcagacctg
agctttggcccaaccaatctgcgcgagttgcccttgccctcaggtatgagcggcgcgcag
cggctgctgcaagactttgtgccgcgcatggcggcataccaggaagcgcgcgactacccc
ggccgcaagggcgtgtcctacctgtcggtgcacctgcgctttggcaccgtgtccatccgc
cagttggcggcgctggcagcaaagcaggcggccgagggctgcgggggggcgcagacctgg
ctatcggagctggcctggcgcgacttctatttcatgatcctgtggcaccacccgcaggta
gtcactcagtcgttcaagcctgagtacgaccgcgtgcagtgggacgaagcgcccgagctg
tggcaggcctggtgcgaggcgcgcaccggctacccgctggtcgatgccgccatgcaccag
ctactgcaaaccggctatatgcacaaccgcctgcgcatggtggtggccagctttttgacc
aaggatttgggcattgactggcgccgcggcgagcgtttttttgcccagcacctgaacgac
tacgacctggccgccaacaacggcggctggcagtgggcggcgtccaccgggtgcgacgca
cagccctacttccgcatcttcaaccccatcacgcagtcgcagcgctttgatcccgacggc
acgttcatccgccgctacctgcccgagctggtcggcgtgccagatgcacatatccacttt
cctgccgccatgaagcctgccgccttggcggcctgcggcctacgcctgggcgtggactac
ccggtgcccgtcgtggaccacgcgcgggcgcgtcagcgcacgctgatgcgtttttcgctt
ctgccagagagtgagatttcatga
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