Alicycliphilus denitrificans K601: Alide2_3513
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Entry
Alide2_3513 CDS
T01463
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Alide2_3513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adk03019
]
Alide2_3513
Enzymes [BR:
adk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Alide2_3513
Messenger RNA biogenesis [BR:
adk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Alide2_3513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEB85841
UniProt:
F4GBJ6
LinkDB
All DBs
Position
complement(3653570..3655138)
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AA seq
522 aa
AA seq
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MIKTFIDKLLGKGAAGAGRGARRRFGKREEVPASVHGIDPELVDRRATDVVRTLKQAGYE
AYIVGGAVRDLLLGLKPKDFDVATNATPEQVKGLFRRAFIIGKRFRIVHVVHGRGREHEV
IEVSTFRAYMDNAAAEQVSGNEKTSKAQLSGMQHAVDASGRVLRDNVWGPQDEDATRRDF
TVNAMYYDPETQVVVDFHKGIEDAKRRVLRMIGDPATRYREDPVRIIRAVRFAAKLSPLG
FALEPKTAKPLLACEPLLQEVPQSRLFDEMLKLLQTGHALASVAQLRGLGLEKGIYPLLD
VVVGRADQPFVQAALADTDRRVGEGKTVAPSFLLACVLWQDVKAGWEQRLAAQQHAFPAL
QEAIDDVFDKRIGDVSGRGKLAADMREIWVMQPRFEKRSGSTPFSMIAHIRFRAGFDFLR
LRADVGEVEEGLAEWWQEFSLADDARREDMIDQVREEQRVRQRKAQPAARRAPRAAEAVA
DAPSEEEAAPADAAAPKKRRRRRRKSPAGGANGGPASAAGDA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccttcatcgacaaactgctgggcaagggcgccgccggcgcgggccgaggc
gccaggcgccgcttcggcaagcgcgaagaggtgcccgcctcggtgcacggcatcgacccc
gaactcgtggaccgccgcgccaccgacgtggtgcgcacgctcaagcaggcgggctacgag
gcctacatcgtcggcggcgccgtgcgcgacctgctgctgggcctcaagccaaaggacttc
gacgtggccaccaacgccacgcccgagcaggtcaagggcctgttccggcgcgccttcatc
atcggcaagcgctttcgcatcgtgcacgtggtgcacggccgcgggcgcgagcacgaggtg
atcgaggtctccaccttccgtgcctacatggacaacgccgccgccgagcaggtcagcggc
aacgagaagaccagcaaggcgcagctttccggcatgcagcacgccgtggacgccagcggc
cgcgtgctgcgcgacaacgtctggggcccgcaggatgaggacgccacgcggcgcgacttc
accgtcaacgccatgtactacgaccccgagacgcaggtcgtggtggatttccacaagggc
atagaggacgccaagcgccgcgtgctgcgcatgatcggcgatccggccacgcgctaccgc
gaggacccggtgcgcatcatccgcgcggtgcgcttcgccgccaagcttagcccgctgggc
ttcgcgctggagcccaagacggccaagcccctgctggcctgcgagccgctgctgcaggag
gtgccgcaaagccgcctgttcgacgagatgctcaagctgctgcagaccggccatgcgctg
gcctccgtcgcgcagctcaggggcctggggctggagaagggcatctacccgctgctggac
gtggtggtgggccgcgcggaccagcccttcgtgcaggccgcgctggccgacaccgaccgc
cgcgtgggcgagggcaagaccgtggcgcccagcttcctgctggcctgcgtgctgtggcag
gacgtgaaggccggctgggagcagcgcctcgccgcgcagcagcacgccttcccggcgctg
caggaagcgatcgacgacgtgttcgacaagcgcatcggcgacgtgtccggccgcggcaag
ctggcggccgacatgcgcgagatctgggtcatgcagccgcgcttcgagaagcgctcgggc
agcacgcccttcagcatgatcgcccacatacgctttcgcgccggcttcgacttcctgcgc
ctgcgcgccgacgtgggcgaggtcgaggaagggctggccgaatggtggcaggagttctcg
ctggccgacgacgcgcgccgcgaggacatgatcgatcaggtgcgcgaggaacagcgcgtg
cgccagcgcaaggctcagcccgccgcacggcgcgcacccagggcggccgaggccgtggcc
gatgcgccgtccgaggaggaggccgcccccgccgacgccgcggcgcctaaaaagcgccgc
cgccgtcgccgcaagagcccggccggcggcgccaacggcggcccggcgtccgcggccggc
gacgcgtga
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