Alicycliphilus denitrificans K601: Alide2_3637
Help
Entry
Alide2_3637 CDS
T01463
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk03030
DNA replication
adk03410
Base excision repair
adk03420
Nucleotide excision repair
adk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alide2_3637
03410 Base excision repair
Alide2_3637
03420 Nucleotide excision repair
Alide2_3637
03440 Homologous recombination
Alide2_3637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adk03032
]
Alide2_3637
03400 DNA repair and recombination proteins [BR:
adk03400
]
Alide2_3637
Enzymes [BR:
adk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Alide2_3637
DNA replication proteins [BR:
adk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Alide2_3637
DNA repair and recombination proteins [BR:
adk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Alide2_3637
NER (nucleotide excision repair)
GGR (global genome repair) factors
Alide2_3637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AEB85962
UniProt:
F4GDD3
LinkDB
All DBs
Position
complement(3779289..3782054)
Genome browser
AA seq
921 aa
AA seq
DB search
MSDTKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSAATGAIRGMINMLQALKKEVHADYA
ACVFDASGPTFRDAIYPDYKANRAPMPEDLRAQIEPIHEVVRLLGWPVLAIEGVEADDVI
GTLARAAAGQGMRVVISSGDKDLSQLVDEHVTIIDTMNGKRRDVAGVTAEFGVPPALMVD
FQALVGDAVDNVPGVPKVGPKTAAKWLAEYGSLDALVAHAGAIKGVAGENLRGALDWLPT
ARELVTIKTDCDLSGHVAGLPAMDAIAFSAEQTGNLADFYQKYGFKSLARALKPEAAPAG
ASGDLFDAPDASTVATRAQHRDVAYDIILTWAQLDDWLARVRAAPLAAIDTETTSLDELR
AEIVGISFSVEPGAAAYIPLAHDGPDTPAQLPLAEVLARLKPWLEDPKHPKLGQHVKYDR
HVFANHGIEVRGYVHDTMLQSYVLEVHKPHGLASLAERHTGRTGISYEDLCGKGAKQIPF
SQVPVDKAAAYSCEDSDQTLDVHRVLWPQLEADEKLRGIYALEIACSETLFRIERNGVLI
DADRLAAQSHALGQRILQLEQEAYDIAGQPFNLGSPKQLGEIFFDKLGMPVVKKTATGAR
STDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYTDKLAQLADPRTGRVHTHYAQAVAVTG
RLSSNDPNLQNIPIRTPEGRRVREAFVAPPGRVIASCDYSQIELRIMAHISGDEALLRAF
HEGLDVHRATAAEVFGVALGQVTSEQRRYAKVINFGLIYGMSSYGLAKNLGIDNTAAKNY
IDRYFQRYPGVWQYMQDTKAQAKARGYVETVFGRRLYLPEINSPNGPRRSAAERAAINAP
MQGTAADLIKKAMVQVQDALDAAKPEVLMIMQVHDELVFELPEGDVNWLRAEVPRIMAGV
AELKVPLLAEVGVGPDWDKAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccaaaaccctggtgctggtcgatggttccagctacctctaccgcgccttc
catgccatgcccgacctgcgcgccgtgccgggcgaccccacgagcgcggccacgggggcg
atacgcggcatgatcaacatgctgcaggcgctcaagaaggaggtgcatgccgactacgcg
gcctgcgtgttcgacgccagcggccccaccttccgcgacgccatctaccccgactacaag
gccaaccgcgcgcccatgcccgaggacctgcgcgcgcagatcgagcccatccacgaagtg
gtgcggctgttgggctggccagtgctggccatcgagggcgtggaggccgacgacgtgata
ggcaccctggccagggccgcggccggccagggcatgcgggtcgtgatatcgagcggcgac
aaggacctgagccagctcgtggacgagcacgtcaccatcatcgacaccatgaacggcaag
cggcgcgacgtggccggcgtgacggccgagttcggcgtgccgcccgcgctgatggtggac
ttccaggccctggtgggcgacgccgtggacaacgtgccgggcgtcccgaaggtcggcccc
aagacggccgccaagtggctcgcggaatacggctcgctggacgcgctggtggcccacgcc
ggcgccatcaagggcgtggccggcgagaacctgcgcggcgcgctggactggctgcccacg
gcgcgcgagctcgtcaccatcaagaccgactgcgacctgagtggccatgtggccggcctg
cctgctatggatgcgatagcttttagcgcagagcagacgggcaatttggccgatttttat
caaaaatacggcttcaagagcctggcccgcgcgctcaagcccgaggccgctcccgccggc
gccagcggcgacctgttcgacgcgcccgatgccagcaccgtcgccacccgggcccagcac
cgcgacgtggcctacgacatcatcctgacctgggcgcagctcgacgactggctggcgcgg
gtgagggccgcgccgctggcggccatcgataccgagaccacctcgctcgacgaactgcgc
gccgagatcgtgggcatctccttcagcgtcgagcccggcgccgccgcctacatccccctg
gcccacgacggcccggacacgcccgcgcagctgccgctggccgaggtgctggcgcgcctg
aagccgtggctggaggacccgaagcacccgaagctgggccagcacgtcaagtacgaccgc
cacgtgttcgccaaccacggcatagaggtgcgtggctatgtgcacgacaccatgctgcaa
agctacgtgctggaggtgcacaagccccacggcctcgcgagcctggccgagcgccacacg
ggccgcaccggcatcagctacgaagacctgtgcggcaagggcgccaagcagattccgttc
tcgcaggtgcccgtggacaaggccgcggcctattcctgcgaggactccgaccagacgctc
gacgtgcaccgcgtgctctggccgcagctcgaggccgacgagaagctgcgcggcatctac
gcgctggagatcgcgtgcagcgagacgctgttccgcatcgagcgcaacggcgtgctcatc
gacgcggacaggctcgccgcccagagccatgcgctgggccagcgcatcctgcagctggag
caggaggcctacgacatcgcgggccagcccttcaatctgggcagccccaagcagctcggc
gagatcttcttcgacaagctcggcatgcccgtcgtcaagaagacggcgaccggcgcgcgc
agcaccgacgaggaggtgctggagaagctcgccgaggactatcccctgcccgccaagctg
ctggagcaccgcagcctctccaagctcaagggcacctacaccgacaagctcgcccagctg
gccgacccgcgcaccggccgcgtgcacacgcactacgcccaggccgtggccgtgaccggg
cgcctgtcgagcaacgaccccaacctgcagaacatccccatccgcacgcccgagggccgg
cgcgtgcgcgaggccttcgtcgccccgccgggccgcgtgatcgcgagctgcgactacagc
cagatcgagctgcgcatcatggcccacatcagcggcgacgaggccctgctgcgcgccttc
cacgagggactggacgtgcaccgcgccacggcggccgaggtgttcggcgtggcgctcggc
caggtcacgagcgagcagcgccgctacgccaaggtcatcaacttcggcctgatctacggc
atgagcagctacggcctggcgaagaacctcggcatcgacaacacggccgccaagaactac
atcgaccgctacttccagcgctaccccggggtgtggcagtacatgcaggacaccaaggca
caggccaaggcgcgcggctacgtcgagaccgtgttcggccggcgtctgtacctgcccgag
atcaactcccccaacggcccgcgccgcagcgcggccgagcgcgccgccatcaacgcgccc
atgcagggcacggcggccgacctgatcaagaaggccatggtccaggtgcaggacgcgctg
gatgcagccaagcccgaagtgctcatgatcatgcaggtgcacgacgaactcgtcttcgag
ctgcccgagggcgacgtgaactggctgcgcgccgaggtgccgcgcatcatggcgggcgtg
gccgagctcaaggtgccgctgctggccgaggtgggcgtggggccggactgggacaaggcg
cattga
DBGET
integrated database retrieval system
