KEGG   Alicycliphilus denitrificans K601: Alide2_3644
Entry
Alide2_3644       CDS       T01463                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
adk  Alicycliphilus denitrificans K601
Pathway
adk03420  Nucleotide excision repair
adk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:adk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Alide2_3644
   03430 Mismatch repair
    Alide2_3644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:adk03400]
    Alide2_3644
Enzymes [BR:adk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Alide2_3644
DNA repair and recombination proteins [BR:adk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Alide2_3644
   MMR (mismatch excision repair)
    Other MMR factors
     Alide2_3644
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30 PQQ_3
Other DBs
NCBI-ProteinID: AEB85969
UniProt: F4GDE0
LinkDB
Position
complement(3788719..3791109)
AA seq 796 aa
MHSPESFPPAPAALLQGLNPEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLSTGHA
TPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHHKLAGLPQSFQ
ILDTQDQLSAVKRLCKQFNVDEERFPPKQLAYFIAGCKEEGLRPRDVEVHDSDTRKKVEL
YQLYEEQCQREGVVDFGELMLRSFELLRDNDPVRVHYQRRFRHILVDEFQDTNRLQYAWL
KQLAGDVVDGRLVTQGGVIAVGDDDQSIYAFRGARVGNMQDFVREFDVRHQIKLEQNYRS
YSNILDSANALIAHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWIVDEIRQLVREGP
MPRSEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKHALAYLRLLENPHDD
TSFMRVVNFPPRGIGARTLEQLQDAARGSGCSLHDAVSSVPGKAGANLGAFVAMVDVMRE
QTQGRNLRAIIGQVLESSGLLEHYRNEKEGADRLENLDELISAAESFVTQEGFGRDAVAL
PLDETGAALTQSPASQGLDPNRPLLQQPLVDTDTGETLSPLAAFLTHAALEAGDNQAQAG
QDAVQLMTVHASKGLEFDCVFIGGMEEGLFPHENAMSDQGGLEEERRLMYVAITRARKRL
YLSHAQTRLLHGQTRYNVRSRFFDELPEEALKWLTPRQQGFGSYAPDSRAASAYGAGARA
GFGFNAAAFASPPVPPRKEEPAHGLRVGLAVFHTKFGEGKVLAIEGQGDDARAQVHFPRH
GTKWLALSVAKLTVVE
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgcactccccagaatcgtttccgccggcgcctgcagcgctcctgcaaggcctgaatccc
gagcagctcgccgccgtcaccctgcccgcgggccatgcgctgatcctggcgggcgcgggg
tcgggcaagacgcgcgtgctcaccacgcgcatcgcctggctgctctcgaccggccatgcc
acgccgggcggcatcctggccgtcaccttcaccaacaaggcggccaaggagatgctcacg
cgcctgtccgccatgctgcccatcaacgtgcgcggcatgtggatcggcaccttccacggc
ctgtgcaaccgcatgctgcgcgcgcaccacaagctggccggcctgccgcagtcgttccag
atcctggatacgcaggaccagctctcggccgtcaagcgcctgtgcaagcagttcaacgtg
gacgaggagcgctttcccccgaagcagctcgcatacttcatcgccggctgcaaggaggag
ggcctgcgcccgcgcgacgtggaggtgcacgactccgacacgcgcaagaaggtggagctc
taccagctctacgaggagcagtgccagcgcgagggcgtggtggacttcggcgagctgatg
ctgcgctccttcgagctgctgcgtgacaacgaccccgtgcgcgtgcactaccagcggcgc
ttccggcacatcctggtggacgagttccaggacaccaacaggctgcagtacgcctggctc
aagcagctcgcgggcgacgtggtggacgggcgcctggtcacccagggcggcgtgatcgcc
gtgggcgacgacgaccagagcatctacgccttccgcggcgcgcgcgtgggcaacatgcag
gacttcgtgcgcgagttcgacgtgcgccaccagatcaagctggagcagaactaccgaagc
tacagcaacatcctcgactcggccaacgcgctgatcgcacacaacagccgccgcctgggc
aagaacctgcgcaccacgcaggggccgggcgagcccgtgcgcgtgtacgaggcgcccacc
gatctggccgaggcgcagtggatcgtggacgagatccggcagctcgtgcgcgagggcccg
atgccgcgcagcgagatcgccgtgctctaccgcagcaatgcgcagagccgggtcatcgaa
tcggccctgttcaacgccagcgtgccctaccgcgtgtacggcggcctgcgcttcttcgag
cgcgccgagatcaagcacgcgctggcctacctgcgcctgctggagaacccgcacgacgac
acgagcttcatgcgcgtggtcaacttcccgccgcgcggcataggcgcgcgcacgctggag
cagctgcaggacgccgcgcgcggcagcggctgctcgctgcacgacgcggtgagcagcgtg
cccggcaaggcgggcgcgaacctgggcgccttcgtggccatggtggatgtgatgcgcgag
cagacccagggccggaacctgcgcgccatcatcggccaggtgctggagtccagcggcctg
ctggagcactaccgcaacgagaaggagggcgcggaccggctggagaacctggacgagctc
atcagcgcggccgagagcttcgtcacccaggagggcttcggccgcgacgccgtggccctg
ccgctcgacgaaacgggcgcggcgctcacgcaaagccccgccagccaggggctggacccg
aaccggccgctcctgcagcagcccctggtggacaccgacacgggcgagacgctctcgccc
ctggccgccttcctcacgcatgcggcgctggaggcaggcgacaaccaagcccaggccggg
caggacgcggtgcagctcatgaccgtgcacgccagcaagggcctggagttcgactgcgtg
ttcatcggcggcatggaggagggcctgttcccgcacgagaacgccatgagcgaccagggt
ggcttggaggaagagcgccgcctgatgtacgtggccatcacccgcgcgagaaagcgcctg
tacctgagccacgcgcagacccgtttgctgcacggccagacgcgctacaacgtcaggagc
cgcttcttcgacgaactgcccgaggaggcgctcaagtggctcacgccccggcagcagggg
tttggctcttatgctcctgattcaagagctgcaagcgcttatggtgcgggcgccagggcc
ggttttggcttcaacgccgcggccttcgccagcccacccgtgccgccgcgcaaggaggag
cccgcccacggcctgcgcgtggggctggcggtgttccacaccaagttcggcgagggcaag
gtgctggccatcgaaggccagggcgacgacgcgcgcgcccaggtgcactttccgcgccac
ggtaccaagtggctggcgctgtcggtggccaagctcacggtggtcgagtag

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