Entry |
|
Name |
(GenBank) UvrD/REP helicase
|
KO |
|
Organism |
adk Alicycliphilus denitrificans K601
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:adk00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Alide2_3644
03430 Mismatch repair
Alide2_3644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:adk03400]
Alide2_3644
Enzymes [BR:adk01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Alide2_3644
DNA repair and recombination proteins [BR:adk03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Alide2_3644
MMR (mismatch excision repair)
Other MMR factors
Alide2_3644
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3788719..3791109)
|
AA seq |
796 aa
MHSPESFPPAPAALLQGLNPEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLSTGHA
TPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHHKLAGLPQSFQ
ILDTQDQLSAVKRLCKQFNVDEERFPPKQLAYFIAGCKEEGLRPRDVEVHDSDTRKKVEL
YQLYEEQCQREGVVDFGELMLRSFELLRDNDPVRVHYQRRFRHILVDEFQDTNRLQYAWL
KQLAGDVVDGRLVTQGGVIAVGDDDQSIYAFRGARVGNMQDFVREFDVRHQIKLEQNYRS
YSNILDSANALIAHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWIVDEIRQLVREGP
MPRSEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKHALAYLRLLENPHDD
TSFMRVVNFPPRGIGARTLEQLQDAARGSGCSLHDAVSSVPGKAGANLGAFVAMVDVMRE
QTQGRNLRAIIGQVLESSGLLEHYRNEKEGADRLENLDELISAAESFVTQEGFGRDAVAL
PLDETGAALTQSPASQGLDPNRPLLQQPLVDTDTGETLSPLAAFLTHAALEAGDNQAQAG
QDAVQLMTVHASKGLEFDCVFIGGMEEGLFPHENAMSDQGGLEEERRLMYVAITRARKRL
YLSHAQTRLLHGQTRYNVRSRFFDELPEEALKWLTPRQQGFGSYAPDSRAASAYGAGARA
GFGFNAAAFASPPVPPRKEEPAHGLRVGLAVFHTKFGEGKVLAIEGQGDDARAQVHFPRH
GTKWLALSVAKLTVVE |
NT seq |
2391 nt +upstreamnt +downstreamnt
atgcactccccagaatcgtttccgccggcgcctgcagcgctcctgcaaggcctgaatccc
gagcagctcgccgccgtcaccctgcccgcgggccatgcgctgatcctggcgggcgcgggg
tcgggcaagacgcgcgtgctcaccacgcgcatcgcctggctgctctcgaccggccatgcc
acgccgggcggcatcctggccgtcaccttcaccaacaaggcggccaaggagatgctcacg
cgcctgtccgccatgctgcccatcaacgtgcgcggcatgtggatcggcaccttccacggc
ctgtgcaaccgcatgctgcgcgcgcaccacaagctggccggcctgccgcagtcgttccag
atcctggatacgcaggaccagctctcggccgtcaagcgcctgtgcaagcagttcaacgtg
gacgaggagcgctttcccccgaagcagctcgcatacttcatcgccggctgcaaggaggag
ggcctgcgcccgcgcgacgtggaggtgcacgactccgacacgcgcaagaaggtggagctc
taccagctctacgaggagcagtgccagcgcgagggcgtggtggacttcggcgagctgatg
ctgcgctccttcgagctgctgcgtgacaacgaccccgtgcgcgtgcactaccagcggcgc
ttccggcacatcctggtggacgagttccaggacaccaacaggctgcagtacgcctggctc
aagcagctcgcgggcgacgtggtggacgggcgcctggtcacccagggcggcgtgatcgcc
gtgggcgacgacgaccagagcatctacgccttccgcggcgcgcgcgtgggcaacatgcag
gacttcgtgcgcgagttcgacgtgcgccaccagatcaagctggagcagaactaccgaagc
tacagcaacatcctcgactcggccaacgcgctgatcgcacacaacagccgccgcctgggc
aagaacctgcgcaccacgcaggggccgggcgagcccgtgcgcgtgtacgaggcgcccacc
gatctggccgaggcgcagtggatcgtggacgagatccggcagctcgtgcgcgagggcccg
atgccgcgcagcgagatcgccgtgctctaccgcagcaatgcgcagagccgggtcatcgaa
tcggccctgttcaacgccagcgtgccctaccgcgtgtacggcggcctgcgcttcttcgag
cgcgccgagatcaagcacgcgctggcctacctgcgcctgctggagaacccgcacgacgac
acgagcttcatgcgcgtggtcaacttcccgccgcgcggcataggcgcgcgcacgctggag
cagctgcaggacgccgcgcgcggcagcggctgctcgctgcacgacgcggtgagcagcgtg
cccggcaaggcgggcgcgaacctgggcgccttcgtggccatggtggatgtgatgcgcgag
cagacccagggccggaacctgcgcgccatcatcggccaggtgctggagtccagcggcctg
ctggagcactaccgcaacgagaaggagggcgcggaccggctggagaacctggacgagctc
atcagcgcggccgagagcttcgtcacccaggagggcttcggccgcgacgccgtggccctg
ccgctcgacgaaacgggcgcggcgctcacgcaaagccccgccagccaggggctggacccg
aaccggccgctcctgcagcagcccctggtggacaccgacacgggcgagacgctctcgccc
ctggccgccttcctcacgcatgcggcgctggaggcaggcgacaaccaagcccaggccggg
caggacgcggtgcagctcatgaccgtgcacgccagcaagggcctggagttcgactgcgtg
ttcatcggcggcatggaggagggcctgttcccgcacgagaacgccatgagcgaccagggt
ggcttggaggaagagcgccgcctgatgtacgtggccatcacccgcgcgagaaagcgcctg
tacctgagccacgcgcagacccgtttgctgcacggccagacgcgctacaacgtcaggagc
cgcttcttcgacgaactgcccgaggaggcgctcaagtggctcacgccccggcagcagggg
tttggctcttatgctcctgattcaagagctgcaagcgcttatggtgcgggcgccagggcc
ggttttggcttcaacgccgcggccttcgccagcccacccgtgccgccgcgcaaggaggag
cccgcccacggcctgcgcgtggggctggcggtgttccacaccaagttcggcgagggcaag
gtgctggccatcgaaggccagggcgacgacgcgcgcgcccaggtgcactttccgcgccac
ggtaccaagtggctggcgctgtcggtggccaagctcacggtggtcgagtag |