Alicycliphilus denitrificans K601: Alide2_3966
Help
Entry
Alide2_3966 CDS
T01463
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
adk
Alicycliphilus denitrificans K601
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adk03021
]
Alide2_3966
Transcription machinery [BR:
adk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Alide2_3966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_3
DUF2390
Motif
Other DBs
NCBI-ProteinID:
AEB86286
UniProt:
F4GGR1
LinkDB
All DBs
Position
complement(4128893..4129828)
Genome browser
AA seq
311 aa
AA seq
DB search
MAFQSASATTALAPANPWALVPPLGNLDAYISAVNRLPLLTLEEEQRYAQQFKKDNDLEA
AGRLVLSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPDQGVRLVSYAMHWI
KAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKADAIDADTHRETLSDHEIDMVA
EQLNVKREEVIEMETRLAGGDVLLDPAPSDDGEQAFGPIAYLADTAHEPTAMIESRQRDA
LATDGITSALASLDARSRRIVEQRWLQVNDDGSGGMTLHELAAEYGVSAERIRQIEVAAM
KKMKKALVEHA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcattccagtctgcatctgccacgacggcgctagcacccgcgaacccatgggcgctg
gttccgccattgggcaacctggatgcctatatctccgccgtcaaccgcctgcccctgctc
actctggaggaggagcagcgctatgcgcagcagttcaagaaggacaacgacctggaggcc
gcaggccgcctggtgctttcgcacctgcgcttggtggtgtccatctcgcgccagtacctg
ggctacggcctgccgcatggcgacctgatccaggagggcaacgtgggcctgatgaaggcc
gtcaagcgcttcgatcccgaccagggcgtgcgcctggtgagctacgccatgcactggatc
aaggccgagatccacgagtacatcctgaagaactggcgcatggtcaaggtggcgaccacc
aaggcccagcgcaagctgttcttcaacctgcgctccatgaagcagggcttcaaggccgac
gccatcgacgccgatacgcaccgcgagacgctgtccgaccatgagatcgacatggtggcc
gagcagctcaacgtcaagcgcgaggaggtcatcgagatggagacgcgcctggccggcggc
gacgtgctgctggaccccgccccgtcggacgacggcgagcaggccttcggccccattgcc
tatctggccgacacggcccacgagcccacggccatgatcgagtcgcgccagcgcgacgcg
ctggccaccgacggcatcacctcggcgctcgccagcctggacgcgcgcagccgccgcatc
gtggagcagcgctggctgcaggtgaacgacgacggctcgggcggcatgacgctgcacgag
ctggccgccgagtacggcgtgagcgccgagcgcatacgccagatcgaggtggctgcgatg
aagaagatgaagaaggcattggtcgagcacgcctga
DBGET
integrated database retrieval system
