Alicycliphilus denitrificans K601: Alide2_4063
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Entry
Alide2_4063 CDS
T01463
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
adk
Alicycliphilus denitrificans K601
Pathway
adk00300
Lysine biosynthesis
adk00550
Peptidoglycan biosynthesis
adk01100
Metabolic pathways
adk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
adk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Alide2_4063
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Alide2_4063
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Alide2_4063
Enzymes [BR:
adk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Alide2_4063
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEB86382
UniProt:
F4G536
LinkDB
All DBs
Position
complement(4235965..4237356)
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AA seq
463 aa
AA seq
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MSHTSTTPMMTLRQAFDLLRARIPAARLVGDGATPLMRVHTDTRTLAAGDLFVALKGERF
DANSLLPQARAAGAAAAIAHGALEAAGLPGVEVPDTLAALGVLAAGWRAQRTLPLVAVTG
SNGKTTVTQMIASVLRAWKGDAALATQGNFNNDVGLPLTLLRLRPAHEAAVVELGMNHPG
EIAYLAGIARPTVALVNNAQREHLEFMHTVEAVARENGSVLAALCAGGVAVFPAADAFTP
LWRELAGAHRCITFGGDAADVRCAHAQWQDGAWHLRVQTPQGAFDTLLSIAGRHNVTNAL
AAAACALAAGAPLAAIARGLAAFEPVKGRSRAFAVRCQGRAIAVVDDSYNANPDSVRAAI
DVLAELPGPRLLVLGDMGEVGGQGPQFHAEAGAHARSRGIEQVFALGALSAHVAGARHFE
DMASLIAAVRAQLPGVGSVLVKGSRFMKMERVVQAIEEEDACS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaccagcacgacccccatgatgaccctgcggcaggccttcgatctgctgcgc
gcgcgcatacccgcggcgcgcctggtgggcgacggcgccacgccgctcatgcgcgtgcac
accgacacgcgcacgctggccgcgggcgacctgttcgtggccttgaagggcgagcgtttc
gacgccaacagcctcctgccccaggcgcgcgcggcaggcgctgccgccgccatcgcccat
ggcgccctggaggcagcgggcctgccgggcgtggaggtgcccgacacgctggccgccctg
ggcgtgctggccgccggctggcgcgcgcagcggacgctgccgctggtcgcagtgaccggc
agcaacggcaagaccacggtcacgcagatgattgcctctgtgctgcgcgcctggaaaggc
gatgcggctttggccacgcagggcaacttcaacaacgacgtgggcctgcccctcacgctg
ctgcgcctgcgccccgcgcacgaggcggcggtggtcgagctgggcatgaaccacccgggc
gagatcgcctacctggccggcatcgcgcggcccacggtggccctggtcaacaacgcccag
cgcgagcacctggagttcatgcacacggtggaggccgtggcgcgcgagaacggcagcgtg
ctggccgcgctgtgtgccggcggcgtcgcggtgttccccgccgccgatgcgttcacgccg
ctgtggcgcgagctggcgggtgcgcaccgttgcatcaccttcggcggcgacgcggccgac
gtgcgctgcgcgcacgcacagtggcaggacggcgcttggcatctgcgcgtgcagacgccc
cagggcgcgttcgacacgcttctctccatcgccgggcggcacaacgtcacgaatgcgctg
gccgccgccgcctgcgccctggccgccggcgcgccgctggccgccatcgcccggggcctg
gcggccttcgagccggtcaaggggcgttcgcgcgcgttcgcggtgcgctgccagggccgc
gccatcgcggtggtggacgacagctacaacgccaaccccgactccgtgcgcgccgccatc
gacgtgctggccgagctgcccggcccgcgcctgctggtgctcggggacatgggcgaggtg
ggcgggcaggggccgcagttccatgccgaggccggcgcccatgcgcgcagcagaggcata
gagcaggtgttcgccctgggcgcgctcagcgcccacgtggcgggggcgcggcatttcgag
gacatggcatcgctgatagcggcggtgcgcgcacaactgcccggggtgggcagcgtgctg
gtgaaggggtcgaggttcatgaagatggaacgggtggtgcaggccatcgaagaggaggac
gcatgctcctga
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